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AffymetrixDataTestFiles

Bioc current

Affymetrix Data Files (CEL, CDF, CHP, EXP, PGF, PSI) for Testing

v0.50.0 · experiment · LGPL-2.1

Release Lineage

Entered 2.13 · Oct 15, 2013

Current · Requires R 4.6

1.0 In 26 of 49 releases 3.23

Description

This package contains annotation data files and sample data files of Affymetrix file formats. The files originate from the Affymetrix' Fusion SDK distribution and other official sources.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

1 0 exported

Complexity

2 avg / 2 max

Call network

1 nodes / 0 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

173

Files

52

Compiled share

0%

Has compiled src

No

Language breakdown

R 61 (35.3%)Docs 112 (64.7%)

API

Exported functions

0

Internal functions

1

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

2.5.0

System requirements

C++ standard

License

LGPL-2.1

License flags

SPDX valid, OSI approved

History

Versions

26

First release

2013-12-13

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

0

LOC over versions

v2.13: 217 LOCv2.14: 217 LOCv3.0: 217 LOCv3.1: 173 LOCv3.2: 173 LOCv3.3: 173 LOCv3.4: 173 LOCv3.5: 173 LOCv3.6: 173 LOCv3.7: 173 LOCv3.8: 173 LOCv3.9: 173 LOCv3.10: 173 LOCv3.11: 173 LOCv3.12: 173 LOCv3.13: 173 LOCv3.14: 173 LOCv3.15: 173 LOCv3.16: 173 LOCv3.17: 173 LOCv3.18: 173 LOCv3.19: 173 LOCv3.20: 173 LOCv3.21: 173 LOCv3.22: 173 LOCv3.23: 173 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Topics

Depended on by (3)

Bioconductor (2)

CRAN (1)

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("AffymetrixDataTestFiles")
Bengtsson, H., Bullard, J., & Hansen, K. D. (2026). AffymetrixDataTestFiles: Affymetrix Data Files (CEL, CDF, CHP, EXP, PGF, PSI) for Testing (Version 0.50.0) [Computer software]. https://bioconductor.org/packages/AffymetrixDataTestFiles

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for AffymetrixDataTestFiles version 0.50.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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