ASSET
Bioc currentAn R package for subset-based association analysis of heterogeneous traits and subtypes
Release Lineage
Entered 2.13 · Oct 15, 2013
Current · Requires R 4.6
Description
An R package for subset-based analysis of heterogeneous traits and disease subtypes. The package allows the user to search through all possible subsets of z-scores to identify the subset of traits giving the best meta-analyzed z-score. Further, it returns a p-value adjusting for the multiple-testing involved in the search. It also allows for searching for the best combination of disease subtypes associated with each variant.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
44 8 exported
Complexity
11.3 avg / 61 max
Call network
44 nodes / 48 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
3,286
Files
32
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
8
Internal functions
36
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
GPL-2 + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
26
First release
2013-10-14
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
100%
Dep drift
6
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 99%
- Return-value docs
- 100%
- References docs
- 33%
Topics
Depended on by (1)
Bioconductor (1)
People
- Samsiddhi Bhattacharjee author maintainer
- Nilanjan Chatterjee author
- Guanghao Qi author
- William Wheeler author
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("ASSET")This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.
Cite the R Observatory
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