R Observatory: Metrics for jsmodule version 2.0.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

jsmodule needs insight (through see), which CRAN will archive unless its check problems are fixed by Nov 14.

jsmodule

2.0.1Package record

'RStudio' Addins and 'Shiny' Modules for Medical Research

0packages depend

6.6Kdownloads / year

4.2%test coverage

13/13flavors OK

Overview

About

Maintained by Jinseob KimCRAN page ↗GitHub ↗Website ↗Issues ↗Declared funder: Zarathu

'RStudio' addins and 'Shiny' modules for descriptive statistics, regression and survival analysis.

Changes in 2.0.1

Update

Generalized all variable names in AI Assistant prompts to use placeholder patterns (_var suffix), making code examples applicable to any dataset instead of being tied to specific example data (e.g., age, sex, time, status, rx).
Added # IMPORTANT: Replace with your actual variable names comments to all code examples in AI prompts to guide users in adapting generated code to their data.
Improved AI Assistant prompt clarity by replacing dataset-specific examples with generic placeholders across all statistical analysis sections.

Bugfix

Fixed AI Assistant result handling to properly support mixed result types (tables, plots, and flextables) returned from analysis code.

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)

install.packages("jsmodule", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("jinseob2kim/jsmodule")

Development version from jinseob2kim/jsmodule. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-jsmodule

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-jsmodule

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 6.8 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-10-25
ERROR12 OK, 1 ERROR2026-10-24
OK13 OK2026-09-09
ERROR12 OK, 1 ERROR2026-09-04
OK13 OK2026-08-05

Show 8 earlier changesHide 8 earlier changes

NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-06-09
ERROR12 OK, 1 ERROR2026-06-08
OK13 OK2026-05-02
ERROR11 OK, 1 ERROR2026-04-25
NOTE13 OK, 1 NOTE2026-04-10
ERROR12 OK, 1 NOTE, 1 ERROR2026-04-09
NOTE13 OK, 1 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 2.0.1

READMEYes · 179 wordsVignettesYes · 4 · dynamicNEWSYes · 100% structured · mentions 2.0.1Citation fileNoWebsiteYes · pkgdown

Help pages: 78 (1 internal)
Examples that run: 91%64 run in a plain check (17 of them under a condition) · 3 never run · 3 hold no code
Exported functions with examples: 94%
Documented parameters: 93%
Return-value docs: 100%
Help pages citing references: 0%

Vignettes (4)

jsmodule HTML
AI Assistant Module Guide HTML
AI Assistant 모듈 가이드 HTML
Introducing Basic statistics of jsmodule HTML

How these are measured

Downloads

6.6K

CRAN downloads in the past year

Rank #4,353 · ~18/day · ~553/mo

Releases R versions

Daily download trend is not available in this view yet.

87030 days

2K90 days

6.6K1 year

Compare downloads with other packages →

Also on132 r2u

How downloads are counted

Repository

jinseob2kim/jsmodule ↗Account: jinseob2kim

26Stars

26Forks

7Open issues

0Open PRs

48Releases

654Commits

20Commit identities

shinyshiny-modulesrstudio-addinsstatisticsrmedical

License file reads as Apache-2.0 · 654 commits · Last activity 2025-12-17 · +4% stars, 30d

Responsiveness

How these are sampled

PRs merged (all time): 86%
Median days to close, 50 most recently updated closed issues: 102
Median days to close, 50 most recently updated closed PRs: 0

Stars over time

2025-09-29 · 242026-10-24 · 26

How these are measured

PracticesBeta

12 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/jinseob2kim/jsmodule on 2026-10-25.

Continuous integration (3)

GitHub ActionsR CMD check workflowAppVeyor

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Docs source (4)

README.Rmdpkgdown

GitHub Pages site last deployed 2025-12-17 · The repository has a site deploy workflow

pkgdown site last built 2025-12-17, before release 2.0.1 (2025-12-18)

Coverage (1)

Coverage reporting

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Show all practicesHide 1 practice

Lint, format, editor (2)

Lint workflowRStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

AI coding toolsBeta

This repository shows signs of AI coding tools.

Claude Codefirst seen on or before 2025-10-10
Named in .Rbuildignore: .claude
Commits: at least 1 crediting it in the message

Counts are commits, not lines of code. Commits by a tool's accounts count once across all of its accounts. Commits crediting it are the largest count among its credit lines, a minimum.How this is detected·Detection ruleset v4 (updated 2026-09-27)

Dependencies

Declared dependencies

48 external dependencies (excludes base and recommended)

Installing jsmodule adds 213 packages (98 with compiled code, 171 MB of source tarballs). Heaviest: stringi 11 MB, TH.data 8.2 MB, ggplot2 6.0 MB.

Depends (1)

R >= 3.4.0

Imports (46)

data.table DT epiDisplay flextable forestploter geepack GGally ggplot2 bslib ggpubr haven Hmisc jskm jstable labelled MatchIt maxstatmethodsofficer pROC purrr readr readxl rstudioapi rvg scales see shiny shinyAce shinycustomloader shinyjs shinyWidgetsstatssurvey survIDINRIsurvivaltimeROCutilsggrepel htmltools riskRegression R6 httr jsonlite openxlsx gridExtra

LinkingTo (0)

none

Suggests (6)

testthat shinytest knitr rmarkdown RAppArmor svglite

Enhances (0)

none

Dependencies facing archival

CRAN will archive these unless their check problems are fixed by the date shown. This package needs each one to install.

insight through seefix by Nov 14

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (14)

Jinseob Kim

Author, Maintainer since 0.7.10 (2019)

Sungho Choi

Author · added in 1.6.4

Jaewoong Heo

Author · added in 1.5.2

Mingu Jee

Author · added in 1.6.13

Yoonkyoung Jeon

Author · added in 1.5.0

Hyungwoo Jo

Author · added in 1.6.0

Yeji Kang

Author · added in 1.6.8

Jinhwan Kim

Author · added in 1.4.0

Hojun LEE

Author · added in 1.6.8

Hyunki Lee

Author · added in 1.3.0

Changwoo Lim

Author · added in 1.3.3

Youngsun Park

Author · added in 1.5.8

Jeongmin Seo

Author · added in 1.6.1

Zarathu

Copyright holder, Funder · added in 0.8.0

Listed in earlier versions (1)

Anpanman

no longer listed · 0.7.10

Releases (61)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
2.0.1Latest
record
2025-12-18 · current release · diff ↗ ·
added 2 exports
aiAssistant, aiAssistantUI
1.6.15
record
2025-10-10 · diff ↗
1.6.13
record
2025-08-20 · diff ↗
1.6.11
record
2025-07-02 · diff ↗
1.6.9
record
2025-05-28 · diff ↗
1.6.8
record
2025-04-25 · diff ↗ ·
added 2 exports
templateGenerator, use_jsmodule_style
R
R 4.5.0 released · 2025-04-11
1.6.4
record
2025-03-10 · diff ↗
1.6.3
record
2025-02-19 · diff ↗
1.6.1
record
2025-01-08 · diff ↗
1.6.0
record
2024-12-11 · diff ↗
1.5.9
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2024-10-17 · diff ↗
1.5.8
record
2024-09-20 · diff ↗
1.5.7
record
2024-08-20 · diff ↗
1.5.6
record
2024-07-18 · diff ↗

Show 54 earlier eventsHide 54 earlier events

1.5.5
record
2024-06-05 · diff ↗
1.5.4
record
2024-05-07 · diff ↗
R
R 4.4.0 released · 2024-04-24
1.5.3
record
2024-04-15 · diff ↗
1.5.2
record
2024-03-27 · diff ↗
1.5.1
record
2024-03-07 · diff ↗
1.5.0
record
2024-02-14 · diff ↗ ·
added 4 exports
forestcoxServer, forestcoxUI, forestglmServer, forestglmUI
1.4.4
record
2023-12-07 · diff ↗
1.4.3
record
2023-10-18 · diff ↗
1.4.2
record
2023-08-08 · diff ↗
R
R 4.3.0 released · 2023-04-21
1.4.1
record
2023-04-14 · diff ↗
1.4.0
record
2023-03-10 · diff ↗
1.3.6
record
2023-02-06 · diff ↗ ·
removed 1 export
jsRepeatedGadjet

added 1 export
jsRepeatedGadget
1.3.4
record
2022-12-15 · diff ↗
1.3.3
record
2022-10-18 · diff ↗ ·
added 2 exports
histogramServer, histogramUI
1.3.2
record
2022-09-12 · diff ↗
1.3.1
record
2022-08-09 · diff ↗
R
R 4.2.0 released · 2022-04-22
1.3.0
record
2022-01-06 · diff ↗ ·
added 6 exports
barServer, barUI, boxServer, boxUI, lineServer, lineUI
1.2.0
record
2021-10-11 · diff ↗
1.1.9
record
2021-09-23 · diff ↗
1.1.8
record
2021-08-09 · diff ↗
R
R 4.1.0 released · 2021-05-18
1.1.7
record
2021-03-14 · diff ↗
1.1.6
record
2021-02-15 · diff ↗ ·
added 2 exports
scatterServer, scatterUI
1.1.5
record
2021-01-17 · diff ↗
1.1.4
record
2020-12-01 · diff ↗
1.1.3
record
2020-11-06 · diff ↗
1.1.2
record
2020-10-12 · diff ↗
1.1.1
record
2020-08-28 · diff ↗
1.1.0
record
2020-07-09 · diff ↗ ·
removed 2 exports
logisticModule, regressModule
1.0.8
record
2020-06-04 · diff ↗
1.0.7
record
2020-04-29 · diff ↗
R
R 4.0.0 released · 2020-04-24
1.0.6
record
2020-03-14 · diff ↗ ·
added 2 exports
rocModule2, timerocModule2
1.0.5
record
2020-02-17 · diff ↗
1.0.4
record
2019-12-02 · diff ↗
1.0.2
record
2019-11-03 · diff ↗
1.0.1
record
2019-09-22 · diff ↗
1.0.0
record
2019-08-19 · diff ↗
0.9.9
record
2019-07-15 · diff ↗ ·
removed 1 export
jsSurveydAddin

added 5 exports
jsBasicExtAddin, jsPropensityExtAddin, jsRepeatedExtAddin, jsSurveyAddin, jsSurveyExtAddin
0.9.2
record
2019-06-18 · diff ↗
0.9.1
record
2019-06-10 · diff ↗
0.9.0
record
2019-06-07 · diff ↗ ·
added 5 exports
ROC_table, optionUI, reclassificationJS, rocModule, rocUI
0.8.5
record
2019-06-05 · diff ↗
0.8.4
record
2019-05-30 · diff ↗
0.8.3
record
2019-05-12 · diff ↗
0.8.2
record
2019-05-11 · diff ↗
R
R 3.6.0 released · 2019-04-26
0.8.1
record
2019-04-19 · diff ↗
0.8.0
record
2019-04-07 · diff ↗ ·
added 2 exports
timerocModule, timerocUI
0.7.10
record
2019-03-08
R
R 3.5.0 released · 2018-04-23

Package metadata

First published: 2019-03-08
Total releases: 61 / 7 yrs
License: Apache License 2.0 OSI
Minimum R: ≥ 3.4.0
Download size: 4.7 MB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("jsmodule")

Format

Kim, J., Zarathu, Choi, S., Heo, J., Jee, M., Jeon, Y., Jo, H., Kang, Y., Kim, J., LEE, H., Lee, H., Lim, C., Park, Y., & Seo, J. (2025). jsmodule: 'RStudio' Addins and 'Shiny' Modules for Medical Research (Version 2.0.1) [Computer software]. https://doi.org/10.32614/CRAN.package.jsmodule

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for jsmodule version 2.0.1 [Data set]. HJJB, LLC. Data release v2026-10-26. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-26, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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