R Observatory: Metrics for LBSPR version 0.1.6

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

LBSPR

0.1.6Package record

Length-Based Spawning Potential Ratio

0packages depend

5.5Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Adrian HordykCRAN page ↗GitHub ↗Issues ↗

Simulate expected equilibrium length composition, yield-per-recruit, and the spawning potential ratio (SPR) using the length-based SPR (LBSPR) model. Fit the LBSPR model to length data to estimate selectivity, relative apical fishing mortality, and the spawning potential ratio for data-limited fisheries. See Hordyk et al (2016) doi:10.1139/cjfas-2015-0422 for more information about the LBSPR assessment method.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("LBSPR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("AdrianHordyk/LBSPR")

Development version from AdrianHordyk/LBSPR. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-lbspr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-LBSPR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-LBSPR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 3.7 min · r-devel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-04-22
ERROR13 OK, 1 ERROR2026-04-18
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.6

README· In the repository, left out of the releaseVignettesYes · 1 · dynamicNEWS· In the repository, left out of the releaseCitation fileNo

Help pages: 25
Examples that run: 67%2 run in a plain check · 1 never run
Exported functions with examples: 16%
Documented parameters: 100%
Return-value docs: 79%
Help pages citing references: 4%

Vignettes (1)

LBSPR: An R package for simulation and estimation using life-history ratios and length composition data

How these are measured

Downloads

5.5K

CRAN downloads in the past year

Rank #5,407 · ~15/day · ~458/mo

Releases R versions

Daily download trend is not available in this view yet.

47530 days

1.5K90 days

5.5K1 year

Compare downloads with other packages →

Also on343 r2u5 autocran

How downloads are counted

Repository

adrianhordyk/lbspr ↗Account: AdrianHordyk

10Stars

61Forks

5Open issues

0Open PRs

1Releases

164Commits

3Commit identities

164 commits · Last activity 2023-07-13 · 0% stars, 30d · Default branch at 0.1.9, ahead of CRAN 0.1.6 (checked 2026-10-11)

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: 10
Median days to close, 50 most recently updated closed PRs: 0

Stars over time

2025-10-06 · 92026-08-21 · 10

How these are measured

PracticesBeta

6 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/adrianhordyk/lbspr on 2026-10-11.

Continuous integration (2)

Travis CI (config file)AppVeyor

Docs source (1)

GitHub Pages site last deployed 2023-07-13

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

Show all practicesHide 1 practice

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies

14 external dependencies (excludes base and recommended)

Installing LBSPR adds 54 packages (30 with compiled code, 52 MB of source tarballs). Heaviest: stringi 11 MB, ggplot2 6.0 MB, bslib 5.6 MB.

Depends (1)

R >= 3.2.4

Imports (10)

dplyr ggplot2graphicsgridExtramethodsplotrix Rcpp RColorBrewer shiny tidyr

LinkingTo (1)

Rcpp

Suggests (5)

colorspace knitr scales shinyBS rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (1)

Adrian Hordyk

Author, Maintainer since 0.1.0 (2016)

Releases (7)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
0.1.6Latest
record
2021-10-06 · current release · diff ↗
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
0.1.5
record
2019-12-05 · diff ↗
0.1.4
record
2019-08-26 · diff ↗
R
R 3.6.0 released · 2019-04-26
0.1.3
record
2019-03-12 · diff ↗
R
R 3.5.0 released · 2018-04-23
0.1.2
record
2017-08-16 · diff ↗
0.1.1
record
2017-06-20 · diff ↗ ·
added 4 exports
LBSPR_NLLabsel, Shiny, calcCurves, plotCurves
R
R 3.4.0 released · 2017-04-21

Show 2 earlier eventsHide 2 earlier events

0.1.0
record
2016-12-13
R
R 3.3.0 released · 2016-05-03

Package metadata

First published: 2016-12-13
Total releases: 7 / 10 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.2.4
Download size: 613 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("LBSPR")

Format

Hordyk, A. (2021). LBSPR: Length-Based Spawning Potential Ratio (Version 0.1.6) [Computer software]. https://doi.org/10.32614/CRAN.package.LBSPR

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for LBSPR version 0.1.6 [Data set]. HJJB, LLC. Data release v2026-10-19. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-19, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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