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Topic: ExpressionData or Transcriptomics or Microarray

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14 packages on Bioconductor tagged ExpressionData or Transcriptomics or Microarray, most distinct IPs first

ExpressionData, Transcriptomics and Microarray in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
nucleR
Nucleosome positioning package for RAlba Sala		Alba Salasoftware28 Apr 20261,14576
NanoStringNCTools
NanoString nCounter ToolsMaddy Griswold		Maddy Griswoldsoftware28 Apr 20261,13677
netresponse
Functional Network AnalysisLeo Lahti		Leo Lahtisoftware28 Apr 202693869
npGSEA
Permutation approximation methods for gene set enrichment analysis (non-permutation GSEA)Jessica Larson		Jessica Larsonsoftware28 Apr 202692347
netSmooth
Network smoothing for scRNAseqJonathan Ronen		Jonathan Ronensoftware28 Apr 2026897170
nnNorm
Spatial and intensity based normalization of cDNA microarray data based on robust neural netsAdi Laurentiu Tarca		Adi Laurentiu Tarcasoftware28 Apr 20268539
normalize450K
Preprocessing of Illumina Infinium 450K dataJonathan Alexander Heiss		Jonathan Alexander Heisssoftware28 Apr 202682213
nnSVG
Scalable identification of spatially variable genes in spatially-resolved transcriptomics dataLukas M. Weber		Lukas M. Webersoftware16 Jul 202681679
NewWave
Negative binomial model for scRNA-seqFederico Agostinis		Federico Agostinissoftware10 Aug 202664744
NetActivity
Compute gene set scores from a deep learning frameworkCarlos Ruiz-Arenas		Carlos Ruiz-Arenassoftware28 Apr 202660059
netboost
Network Analysis Supported by BoostingPascal Schlosser		Pascal Schlossersoftware28 Apr 202656182
netZooR
A menagerie of methods for the inference and analysis of gene regulatory networksMarouen Ben Guebila		Marouen Ben Guebilasoftwareno date on record318
NxtIRFdata
Data for NxtIRFAlex Chit Hei Wong		Alex Chit Hei Wongexperiment5 May 202626598
nanotubes
Mouse nanotube CAGE dataMalte Thodberg		Malte Thodbergexperiment5 May 20262300