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Topic: AffymetrixChip or Preprocessing

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18 packages on Bioconductor tagged AffymetrixChip or Preprocessing, most distinct IPs first

AffymetrixChip and Preprocessing in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
normr
Normalization and difference calling in ChIP-seq dataJohannes Helmuth		Johannes Helmuthsoftware21 May 20261,06483
netSmooth
Network smoothing for scRNAseqJonathan Ronen		Jonathan Ronensoftware28 Apr 2026897170
nnNorm
Spatial and intensity based normalization of cDNA microarray data based on robust neural netsAdi Laurentiu Tarca		Adi Laurentiu Tarcasoftware28 Apr 20268539
nondetects
Non-detects in qPCR dataValeriia Sherina		Valeriia Sherinasoftware28 Apr 202684343
normalize450K
Preprocessing of Illumina Infinium 450K dataJonathan Alexander Heiss		Jonathan Alexander Heisssoftware28 Apr 202682213
nnSVG
Scalable identification of spatially variable genes in spatially-resolved transcriptomics dataLukas M. Weber		Lukas M. Webersoftware16 Jul 202681679
NTW
Predict gene network using an Ordinary Differential Equation (ODE) based methodYuanhua Liu		Yuanhua Liusoftware28 Apr 20266833
nipalsMCIA
Multiple Co-Inertia Analysis via the NIPALS MethodMaximilian Mattessich		Maximilian Mattessichsoftware28 Apr 202668087
netprioR
A model for network-based prioritisation of genesFabian Schmich		Fabian Schmichsoftware30 Oct 202555142
notame
Workflow for non-targeted LC-MS metabolic profilingVilhelm Suksi		Vilhelm Suksisoftware28 Apr 202646165
notameViz
Workflow for non-targeted LC-MS metabolic profilingVilhelm Suksi		Vilhelm Suksisoftware28 Apr 202641982
notameStats
Workflow for non-targeted LC-MS metabolic profilingVilhelm Suksi		Vilhelm Suksisoftware28 Apr 202637768
nugohs1a520180.db
Affymetrix nugohs1a520180 annotation data (chip nugohs1a520180)Philip de Groot		Philip de Grootannotationno date on record27343
nugomm1a520177probe
Probe sequence data for microarrays of type nugomm1a520177Philip de Groot		Philip de Grootannotationno date on record26042
nugomm1a520177.db
Affymetrix nugomm1a520177 annotation data (chip nugomm1a520177)Philip de Groot		Philip de Grootannotationno date on record25243
nugohs1a520180probe
Probe sequence data for microarrays of type nugohs1a520180Philip de Groot		Philip de Grootannotationno date on record24942
nugohs1a520180cdf
nugohs1a520180cdfPhilip de Groot		Philip de Grootannotationno date on record23642
nugomm1a520177cdf
nugomm1a520177cdfPhilip de Groot		Philip de Grootannotationno date on record21842