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Topic: AffymetrixChip or Transcription or SingleCell

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23 packages on Bioconductor tagged AffymetrixChip or Transcription or SingleCell, most distinct IPs first

AffymetrixChip, Transcription and SingleCell in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
infercnv
Infer Copy Number Variation from Single-Cell RNA-Seq DataChristophe Georgescu		Christophe Georgescusoftware28 Apr 20262,709194
IsoformSwitchAnalyzeR
Identify, Annotate and Visualize Isoform Switches with Functional Consequences from both short- and long-read RNA-seq dataKristoffer Vitting-Seerup		Kristoffer Vitting-Seerupsoftware28 Apr 20261,421151
iSEE
Interactive SummarizedExperiment ExplorerKevin Rue-Albrecht		Kevin Rue-Albrechtsoftware28 Apr 20261,237109
InPAS
Identify Novel Alternative PolyAdenylation Sites (PAS) from RNA-seq dataJianhong Ou		Jianhong Ousoftware28 Apr 20261,145143
imcRtools
Methods for imaging mass cytometry data analysisDaniel Schulz		Daniel Schulzsoftware19 May 20261,064181
immApex
Tools for Adaptive Immune Receptor Sequence-Based Machine and Deep LearningNick Borcherding		Nick Borcherdingsoftware28 Apr 202693354
immunoClust
immunoClust - Automated Pipeline for Population Detection in Flow CytometryTill Soerensen		Till Soerensensoftware28 Apr 202691824
IVAS
Identification of genetic Variants affecting Alternative SplicingSeonggyun Han		Seonggyun Hansoftware28 Apr 2026898112
ISAnalytics
Analyze gene therapy vector insertion sites data identified from genomics next generation sequencing reads for clonal tracking studiesFrancesco Gazzo		Francesco Gazzosoftware28 Apr 2026838117
icetea
Integrating Cap Enrichment with Transcript Expression AnalysisVivek Bhardwaj		Vivek Bhardwajsoftware28 Apr 2026838106
iSEEu
iSEE UniverseKevin Rue-Albrecht		Kevin Rue-Albrechtsoftware28 Apr 2026829112
ILoReg
ILoReg: a tool for high-resolution cell population identification from scRNA-Seq dataJohannes Smolander		Johannes Smolandersoftware28 Apr 2026749126
iSEEhub
iSEE for the Bioconductor ExperimentHubKevin Rue-Albrecht		Kevin Rue-Albrechtsoftware28 Apr 2026733141
InterCellar
InterCellar: an R-Shiny app for interactive analysis and exploration of cell-cell communication in single-cell transcriptomicsMarta Interlandi		Marta Interlandisoftware28 Apr 2026731208
infinityFlow
Augmenting Massively Parallel Cytometry Experiments Using Multivariate Non-Linear RegressionsEtienne Becht		Etienne Bechtsoftware28 Apr 202667545
ivygapSE
A SummarizedExperiment for Ivy-GAP dataVJ Carey		VJ Careysoftware28 Apr 2026669152
ISLET
Individual-Specific ceLl typE referencing ToolHao Feng		Hao Fengsoftware28 Apr 202663755
ISoLDE
Integrative Statistics of alleLe Dependent ExpressionChristelle Reynès		Christelle Reynèssoftware28 Apr 20265894
IMAS
Integrative analysis of Multi-omics data for Alternative SplicingSeonggyun Han		Seonggyun Hansoftware3 Feb 2026583
iSEEfier
Streamlining the creation of initial states for starting an iSEE instanceNajla Abassi		Najla Abassisoftware28 Apr 2026503115
iscream
Make fast and memory efficient BED file queries, summaries and matricesJames Eapen		James Eapensoftware28 Apr 202649720
Ibex
Methods for BCR single-cell embeddingNick Borcherding		Nick Borcherdingsoftware28 Apr 2026418134
immLynx
Linking Advanced TCR Python Pipelines and Hugging Face Models in RNick Borcherding		Nick Borcherdingsoftware28 Apr 202634066