Packages

158 packages on Bioconductor tagged BSgenome or Microarray or AnnotationData, most distinct IPs first

BSgenome, Microarray and AnnotationData in Topics

Package	Maintainer	Category	Latest version	Distinct IPs a month	Needs
HDO.db A set of annotation maps describing the entire Human Disease OntologyErqiang Hu	Erqiang Hu	annotation	no date on record	5,277	42
hgu133plus2.db Affymetrix Affymetrix HG-U133_Plus_2 Array annotation data (chip hgu133plus2)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	4,227	43
hgu133a.db Affymetrix Affymetrix HG-U133A Array annotation data (chip hgu133a)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,996	43
hgu133plus2cdf hgu133plus2cdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,618	42
hgu95av2.db Affymetrix Affymetrix HG_U95Av2 Array annotation data (chip hgu95av2)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,605	43
hugene10sttranscriptcluster.db Affymetrix hugene10 annotation data (chip hugene10sttranscriptcluster)Biocore Package Maintainer	Biocore Package Maintainer	annotation	no date on record	1,302	43
hgu95av2cdf hgu95av2cdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,217	42
hgu95av2probe Probe sequence data for microarrays of type hgu95av2Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,164	42
Heatplus Heatmaps with row and/or column covariates and colored clustersAlexander Ploner	Alexander Ploner	software	28 Apr 2026	1,146	4
HMMcopy Copy number prediction with correction for GC and mappability bias for HTS dataDaniel Lai	Daniel Lai	software	28 Apr 2026	1,099	2
Homo.sapiens Annotation package for the Homo.sapiens objectBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,006	82
Harman The removal of batch effects from datasets using a PCA and constrained optimisation based techniqueJason Ross	Jason Ross	software	28 Apr 2026	975	11
hgu133acdf hgu133acdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	971	42
hgu133aprobe Probe sequence data for microarrays of type hgu133aBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	939	42
HELP Tools for HELP data analysisReid F. Thompson	Reid F. Thompson	software	28 Apr 2026	932	8
HEM Heterogeneous error model for identification of differentially expressed genes under multiple conditionsHyungJun Cho	HyungJun Cho	software	28 Apr 2026	932	8
hgu219.db Affymetrix Human Genome 219 Plate annotation data (chip hgu219)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	879	43
hgu95a.db Affymetrix Affymetrix HG_U95A Array annotation data (chip hgu95a)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	809	43
HybridMTest Hybrid Multiple TestingDemba Fofana	Demba Fofana	software	28 Apr 2026	789	15
hgu133a2.db Affymetrix Affymetrix HG-U133A_2 Array annotation data (chip hgu133a2)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	687	43
hgu133a2cdf hgu133a2cdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	675	42
hu6800.db Affymetrix Affymetrix Hu6800 Array annotation data (chip hu6800)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	666	43
hgu95av2 Affymetrix Human Genome U95 Set Annotation Data (hgu95av2)Biocore Data Team	Biocore Data Team	annotation	no date on record	654	0
hugene20sttranscriptcluster.db Affymetrix hugene20 annotation data (chip hugene20sttranscriptcluster)Biocore Package Maintainer	Biocore Package Maintainer	annotation	no date on record	652	43
HDTD Statistical Inference about the Mean Matrix and the Covariance Matrices in High-Dimensional Transposable Data (HDTD)Anestis Touloumis	Anestis Touloumis	software	28 Apr 2026	581	5
HERON Hierarchical Epitope pROtein biNdingSean McIlwain	Sean McIlwain	software	28 Apr 2026	571	73
hta20transcriptcluster.db Affymetrix hta20 annotation data (chip hta20transcriptcluster)Biocore Package Maintainer	Biocore Package Maintainer	annotation	no date on record	568	43
hgu133plus2probe Probe sequence data for microarrays of type hgu133plus2Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	537	42
humanCHRLOC A data package containing annotation data for humanCHRLOCBiocore Data Team	Biocore Data Team	annotation	no date on record	521	0
human.db0 Base Level Annotation databases for humanBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	502	42