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Topic: MassSpectrometry or Homo_sapiens or DifferentialExpression

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35 packages on Bioconductor tagged MassSpectrometry or Homo_sapiens or DifferentialExpression, most distinct IPs first

MassSpectrometry, Homo_sapiens and DifferentialExpression in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
BSgenome.Hsapiens.UCSC.hg38
Full genomic sequences for Homo sapiens (UCSC genome hg38)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record4,98960
BSgenome.Hsapiens.UCSC.hg19
Full genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record2,84258
ballgown
Flexible, isoform-level differential expression analysisJack Fu		Jack Fusoftware4 Nov 20251,84487
baySeq
Empirical Bayesian analysis of patterns of differential expression in count dataSamuel Granjeaud		Samuel Granjeaudsoftware28 Apr 20261,36420
BioNet
Routines for the functional analysis of biological networksMarcus Dittrich		Marcus Dittrichsoftware28 Apr 20261,26250
BASiCS
Bayesian Analysis of Single-Cell Sequencing dataCatalina Vallejos		Catalina Vallejossoftware29 Apr 20261,206129
bambu
Context-Aware Transcript Quantification from Long Read RNA-Seq dataYing Chen		Ying Chensoftware28 Apr 20261,06793
BSgenome.Hsapiens.NCBI.GRCh38
Full genome sequences for Homo sapiens (GRCh38)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record1,01758
BRAIN
Baffling Recursive Algorithm for Isotope distributioN calculationsPiotr Dittwald		Piotr Dittwaldsoftware28 Apr 20261,01419
biobroom
Turn Bioconductor objects into tidy data framesJohn D. Storey		John D. Storeysoftware30 Oct 202589030
BSgenome.Hsapiens.UCSC.hg18
Full genome sequences for Homo sapiens (UCSC version hg18)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record88858
BLMA
BLMA: A package for bi-level meta-analysisVan-Dung Pham		Van-Dung Phamsoftware7 Sep 202688474
blima
Tools for the preprocessing and analysis of the Illumina microarrays on the detector (bead) levelVojtěch Kulvait		Vojtěch Kulvaitsoftware28 Apr 202686866
biosigner
Signature discovery from omics dataEtienne A. Thevenot		Etienne A. Thevenotsoftware28 Apr 2026867102
benchdamic
Benchmark of differential abundance methods on microbiome dataMatteo Calgaro		Matteo Calgarosoftware28 Apr 2026866378
blacksheepr
Outlier Analysis for pairwise differential comparisonRugglesLab		RugglesLabsoftware28 Apr 2026827124
BatchQC
Batch Effects Quality Control SoftwareYaoan Leng		Yaoan Lengsoftware15 Sep 2026818245
biotmle
Targeted Learning with Moderated Statistics for Biomarker DiscoveryNima Hejazi		Nima Hejazisoftware28 Jul 202679493
BANDITS
BANDITS: Bayesian ANalysis of DIfferenTial SplicingSimone Tiberi		Simone Tiberisoftware25 Oct 202677846
bandle
An R package for the Bayesian analysis of differential subcellular localisation experimentsOliver M. Crook		Oliver M. Crooksoftware29 Apr 2026775239
BADER
Bayesian Analysis of Differential Expression in RNA Sequencing DataAndreas Neudecker		Andreas Neudeckersoftware28 Apr 20266820
BASiCStan
Stan implementation of BASiCSAlan O'Callaghan		Alan O'Callaghansoftware2 Jul 2026575155
broadSeq
broadSeq : for streamlined exploration of RNA-seq dataRishi Das Roy		Rishi Das Roysoftware28 Apr 2026553238
BSgenome.Hsapiens.1000genomes.hs37d5
1000genomes Reference Genome Sequence (hs37d5)Julian Gehring		Julian Gehringannotationno date on record48658
BSgenome.Hsapiens.UCSC.hg38.masked
Full masked genomic sequences for Homo sapiens (UCSC version hg38)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record47661
BSgenome.Hsapiens.UCSC.hg19.masked
Full masked genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record46159
batchCorr
Within And Between Batch Correction Of LC-MS Metabolomics DataAnton Ribbenstedt		Anton Ribbenstedtsoftware28 Apr 202642739
biotmleData
Example experimental microarray data set for the "biotmle" R packageNima Hejazi		Nima Hejaziexperiment5 May 20262480
BSgenome.Hsapiens.UCSC.hg17
Full genome sequences for Homo sapiens (UCSC version hg17)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record21358
BSgenome.Hsapiens.UCSC.hg18.masked
Full masked genome sequences for Homo sapiens (UCSC version hg18)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record16259