zetadiv

1.3.0

Functions to Compute Compositional Turnover Using Zeta Diversity

1packages depend

5.6Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Guillaume LatombeFirst published 2015-06-048 releasesCRAN page ↗

Functions to compute compositional turnover using zeta-diversity, the number of species shared by multiple assemblages. The package includes functions to compute zeta-diversity for a specific number of assemblages and to compute zeta-diversity for a range of numbers of assemblages. It also includes functions to explain how zeta-diversity varies with distance and with differences in environmental variables between assemblages, using generalised linear models, linear models with negative constraints, generalised additive models,shape constrained additive models, and I-splines.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("zetadiv", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-zetadiv

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-zetadiv

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-zetadiv

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 4.3 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-03-10
11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 99%
Return-value docs: 96%
References docs: 97%

Downloads

5.6K

CRAN downloads in the past year

Rank #6,119 · ~15/day · ~464/mo

Releases R versions

Daily download trend is not available in this view yet.

39530 days

1.5K90 days

5.6K1 year

Compare downloads with other packages →

Also on90 r2u7 autocran

Dependencies

Declared dependencies

6 external dependencies (excludes base and recommended)

Depends (2)

R >= 4.5.0scam

Imports (10)

statsgraphicsgrDevicesutilscarmgcvvegan geodist nnls glm2

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

pctax

Code & Tests

Datasets

People & History

People (4)

Maintainer (1)

Guillaume Latombe

Author, Maintainer

Authors (4)

Author, Maintainer

Author

Author

Author · added in 1.0

Package Timeline

8 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.3.0Latest
2025-05-28 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
1.2.1
2022-06-11 · diff ↗
unarchivedReturned to CRAN
2022-06-11
archivedRemoved from CRAN
2022-05-23
requires archived package 'Imap'
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
1.2.0
2020-07-02 · diff ↗
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
1.1.1
2018-05-17 · diff ↗
R
R 3.5.0 released · 2018-04-23
1.1.0
2018-04-11 · diff ↗

Show 6 earlier events

1.0.1
2017-06-06 · diff ↗
R
R 3.4.0 released · 2017-04-21
1.0
2016-12-09 · diff ↗
R
R 3.3.0 released · 2016-05-03
0.1
2015-06-04
R
R 3.2.0 released · 2015-04-16

Package metadata

First published: 2015-06-04
Total releases: 8 / 11 yrs
License: GPL-3 OSI
Minimum R: ≥ 4.5.0
Bundled data: 65 KB / 6 files
Download size: 135 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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