R Observatory: Metrics for yaap version 1.0.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

yaap

1.0.0Package record

A Toolkit for Archetypal Analysis Methods

0packages depend

1Kdownloads / year

86.1%test coverage

13/13flavors OK

Overview

About

Maintained by Teo SakelCRAN page ↗Declared funder: MCIU/AEI

Fits archetypal analysis models, including Euclidean, probabilistic, kernel, and directional variants. Methods include classical archetypal analysis from Cutler and Breiman (1994) doi:10.1080/00401706.1994.10485840, PCHA and kernel variants from Mørup and Hansen (2012) doi:10.1016/j.neucom.2011.06.033, probabilistic archetypal analysis from Seth and Eugster (2016) doi:10.1007/s10994-015-5498-8, directional archetypal analysis from Olsen et al. (2022) doi:10.3389/fnins.2022.911034, AA++ initialization from Mair and Sjölund (2023) doi:10.48550/arXiv.2301.13748, coreset-style initialization from Mair and Brefeld (2019) https://proceedings.neurips.cc/paper_files/paper/2019/file/7f278ad602c7f47aa76d1bfc90f20263-Paper.pdf, and adapted AIC from Suleman (2017) doi:10.1109/FUZZ-IEEE.2017.8015385. Provides initialization helpers, model selection paths, plotting methods, 'broom' methods, and a 'tidymodels' recipe step.

Changes in 1.0.0

Initial CRAN submission.
Provides archetypal analysis fitters for Euclidean, probabilistic, kernel, and directional models.
Includes initialization helpers, archetype paths, plotting methods, broom methods, and a tidymodels recipe step.

From NEWS.md in the release

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("yaap", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-yaap

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-yaap

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-yaap

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 5.1 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-04
NOTE12 OK, 1 NOTE2026-08-01
OK8 OK2026-06-08

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.0.0

READMEYes · 488 wordsVignettesYes · 4 · evaluation depends on the environmentNEWSYes · 67% structured · mentions 1.0.0Citation fileNoWebsitenot declared in DESCRIPTION

Help pages: 33 (1 internal)includes a package overview page
Examples that run: 100%13 run in a plain check (1 of them under a condition)
Exported functions with examples: 58%
Documented parameters: 97%
Return-value docs: 100%
Help pages citing references: 27%

Vignettes (4)

How these are measured

Downloads

1K

CRAN downloads in the past year

Rank #22,275 · ~3/day · ~85/mo

Releases R versions

Daily download trend is not available in this view yet.

20330 days

59190 days

1K1 year

Compare downloads with other packages →

Also on22 r2u2 autocran

How downloads are counted

Dependencies

Declared dependencies

22 external dependencies (excludes base and recommended)

Installing yaap adds 13 packages (9 with compiled code, 4.3 MB of source tarballs). Heaviest: vctrs 1.0 MB, rlang 766 KB, cli 629 KB.

Depends (1)

R >= 4.1.0

Imports (11)

genericsgraphicsmethodsMatrixmatrixStats nnls rlangstatstibbleutilsvctrs

LinkingTo (0)

none

Suggests (17)

archetypes bench compositions fda geometry ggplot2 ggtern irlba knitrMASSquadprog recipes rmarkdown RSpectra testthat tune withr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Teo Sakel

MCIU/AEI

Funder

10.13039/501100011033

Releases (1)

1.0.0Latest
record
2026-06-07 · current release
R
R 4.6.0 released · 2026-04-24

Package metadata

First published: 2026-06-07
Total releases: 1 / 1 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 4.1.0
Download size: 1.1 MB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("yaap")

Format

Sakel, T., & MCIU/AEI. (2026). yaap: A Toolkit for Archetypal Analysis Methods (Version 1.0.0) [Computer software]. https://doi.org/10.32614/CRAN.package.yaap

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for yaap version 1.0.0 [Data set]. HJJB, LLC. Data release v2026-10-21. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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