R Observatory: Metrics for vmeasur version 0.1.4

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

vmeasur

0.1.4Package record

Quantify the Contractile Nature of Vessels Monitored under an Operating Microscope

0packages depend

2.9Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by James JW HucklesbyCRAN page ↗

A variety of tools to allow the quantification of videos of the lymphatic vasculature taken under an operating microscope. Lymphatic vessels that have been injected with a variety of blue dyes can be tracked throughout the video to determine their width over time. Code is optimised for efficient processing of multiple large video files. Functions to calculate physiologically relevant parameters and generate graphs from these values are also included.

Install

R (CRAN)Ubuntu (r2u)

install.packages("vmeasur", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-vmeasur

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.1 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-04
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-06-09
ERROR12 OK, 1 ERROR2026-06-08
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.4

READMEYes · 496 wordsVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 11
Examples that run: 50%3 run in a plain check · 2 never run · 1 hold no code
Exported functions with examples: 60%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 0%

How these are measured

Downloads

2.9K

CRAN downloads in the past year

Rank #15,154 · ~8/day · ~238/mo

Releases R versions

Daily download trend is not available in this view yet.

29530 days

80790 days

2.9K1 year

Compare downloads with other packages →

Also on73 r2u

How downloads are counted

Dependencies

Declared dependencies

20 external dependencies (excludes base and recommended)

Installing vmeasur adds 106 packages (51 with compiled code, 81 MB of source tarballs). Heaviest: stringi 11 MB, ggplot2 6.0 MB, igraph 4.8 MB.

Depends (1)

R >= 2.10

Imports (25)

ggplot2 readr stringr tidyr purrr ggpubr imager avtoolsdplyr rlang foreach magrittrgraphicsstatsutilspracma crayon svDialogs pdftools doFuture progressr future scalestcltk

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (4)

James JW Hucklesby

Author, Maintainer since 0.1.4 (2021)

Catherine E Angel

Author

Anthony RJ Phillips

Author

Peter S Russell

Author

Releases (1)

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
0.1.4Latest
record
2021-11-11 · current release
R
R 4.1.0 released · 2021-05-18

Package metadata

First published: 2021-11-11
Total releases: 1 / 5 yrs
License: CC BY-NC-SA 4.0
Minimum R: ≥ 2.10
Bundled data: 162 KB / 1 file
Download size: 1.1 MB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("vmeasur")

Format

Hucklesby, J. J., Angel, C. E., Phillips, A. R., & Russell, P. S. (2021). vmeasur: Quantify the Contractile Nature of Vessels Monitored under an Operating Microscope (Version 0.1.4) [Computer software]. https://doi.org/10.32614/CRAN.package.vmeasur

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for vmeasur version 0.1.4 [Data set]. HJJB, LLC. Data release v2026-10-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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