R Observatory: Metrics for vivo version 0.2.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

vivo

0.2.1Package record

Variable Importance via Oscillations

0packages depend

2.8Kdownloads / year

97.1%test coverage

13/13flavors OK

Overview

About

Maintained by Anna KozakCRAN page ↗GitHub ↗Issues ↗

Provides an easy to calculate local variable importance measure based on Ceteris Paribus profile and global variable importance measure based on Partial Dependence Profiles.

Changes in 0.2.1

small fixes in global_variable_importance()
remove ingredients dependence

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("vivo", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("ModelOriented/vivo")

Development version from ModelOriented/vivo. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-vivo

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-vivo

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-vivo

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.5 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-04
NOTE12 OK, 1 NOTE2026-08-01
OK12 OK2026-04-25
NOTE11 OK, 3 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.2.1

READMEYes · 326 wordsVignettesYes · 2 · dynamicNEWSYes · 33% structured · mentions 0.2.1Citation fileNo

Help pages: 6
Examples that run: 100%5 run in a plain check
Exported functions with examples: 75%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 0%

Vignettes (2)

How these are measured

Downloads

2.8K

CRAN downloads in the past year

Rank #16,712 · ~8/day · ~230/mo

Releases R versions

Daily download trend is not available in this view yet.

27030 days

75990 days

2.8K1 year

Compare downloads with other packages →

Also on64 r2u3 autocran

How downloads are counted

Repository

modeloriented/vivo ↗Organization: ModelOriented

14Stars

4Forks

2Open issues

0Open PRs

0Releases

127Commits

2Commit identities

xaiimlexplainable-artificial-intelligenceinterpretable-machine-learningvariable-importanceexplainable-mlexplainable-ai

127 commits · Last activity 2020-09-26

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: 20
Median days to close, 50 most recently updated closed PRs: 0

How these are measured

PracticesBeta

5 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/modeloriented/vivo on 2026-10-22.

Continuous integration (1)

Travis CI (config file)

Docs source (3)

README.Rmdpkgdown

GitHub Pages site last deployed 2020-09-26

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

9 external dependencies (excludes base and recommended)

Installing vivo adds 31 packages (9 with compiled code, 20 MB of source tarballs). Heaviest: ggplot2 6.0 MB, ingredients 2.4 MB, DALEX 1.5 MB.

Depends (1)

R >= 3.0

Imports (2)

ggplot2 DALEX

LinkingTo (0)

none

Suggests (9)

knitr rmarkdown mlbench randomForest gridExtragridlatticetestthat ingredients

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (2)

Anna Kozak

Author, Maintainer since 0.1.0 (2019)

Przemyslaw Biecek

Author, Thesis advisor

Releases (5)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
0.2.1Latest
record
2020-09-07 · current release · diff ↗
0.2.0
record
2020-07-02 · diff ↗ ·
added 1 export
global_variable_importance
R
R 4.0.0 released · 2020-04-24
0.1.2
record
2020-02-27 · diff ↗
0.1.1
record
2019-09-03 · diff ↗ ·
added 1 export
calculate_variable_split
0.1.0
record
2019-06-17
R
R 3.6.0 released · 2019-04-26

Package metadata

First published: 2019-06-17
Total releases: 5 / 7 yrs
License: GPL-2 OSI
Minimum R: ≥ 3.0
Download size: 137 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("vivo")

Format

Kozak, A., & Biecek, P. (2020). vivo: Variable Importance via Oscillations (Version 0.2.1) [Computer software]. https://doi.org/10.32614/CRAN.package.vivo

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for vivo version 0.2.1 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →