Skip to content

vivaldi

Viral Variant Location and Diversity

v1.0.1 · Mar 21, 2023 · MIT + file LICENSE

Description

Analysis of minor alleles in Illumina sequencing data of viral genomes. Functions in 'vivaldi' primarily operate on vcf files.

Downloads

227

Last 30 days

20167th

619

Last 90 days

2.5K

Last year

Trend: +0.9% (30d vs prior 30d)

CRAN Check Status

3 NOTE
11 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (3 non-OK)
NOTE r-oldrel-macos-arm64

installed package size

installed size is  6.8Mb
  sub-directories of 1Mb or more:
    doc       5.4Mb
    extdata   1.1Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  6.8Mb
  sub-directories of 1Mb or more:
    doc       5.4Mb
    extdata   1.1Mb
NOTE r-oldrel-windows-x86_64

installed package size

installed size is  6.8Mb
  sub-directories of 1Mb or more:
    doc       5.4Mb
    extdata   1.1Mb

Check History

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is  6.8Mb
  sub-directories of 1Mb or more:
    doc       5.4Mb
    extdata   1.1Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  6.8Mb
  sub-directories of 1Mb or more:
    doc       5.4Mb
    extdata   1.1Mb
NOTE r-oldrel-windows-x86_64

installed package size

installed size is  6.8Mb
  sub-directories of 1Mb or more:
    doc       5.4Mb
    extdata   1.1Mb

Dependency Network

Dependencies Reverse dependencies dplyr ggplot2 glue magrittr plotly seqinr tidyr tidyselect vcfR vivaldi

Version History

new 1.0.1 Mar 10, 2026
updated 1.0.1 ← 1.0.0 diff Mar 20, 2023
new 1.0.0 Dec 14, 2022