R Observatory: Metrics for visxhclust version 1.1.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

visxhclust

1.1.0

A Shiny App for Visual Exploration of Hierarchical Clustering

0packages depend

2.9Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Rafael HenkinFirst published 2021-10-192 releasesCRAN page ↗GitHub ↗

A Shiny application and functions for visual exploration of hierarchical clustering with numeric datasets. Allows users to iterative set hyperparameters, select features and evaluate results through various plots and computation of evaluation criteria.

Install

R (CRAN)pak (dev)Ubuntu (r2u)

install.packages("visxhclust", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("rhenkin/visxhclust")

Development version from rhenkin/visxhclust. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-visxhclust

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

13OK

Slowest check: 4.7 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.09

not tracked

Coverage

100%

Documentation · exports

20

Dependencies · direct

Check history

OK2026-08-04
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 468 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 94%
References docs: 0%

Downloads

2.9K

CRAN downloads in the past year

Rank #13,010 · ~8/day · ~243/mo

Releases R versions

Daily download trend is not available in this view yet.

21530 days

79290 days

2.9K1 year

Compare downloads with other packages →

Also on110 r2u

Repository

GitHub ↗ rhenkin/visxhclust

4Stars

0Forks

2Open issues

0Open PRs

2Releases

45Commits

2Contributors

rr-packagerstatsclusteringdata-analysisdata-sciencer-shinyshiny-apps

License GPL-3.0 · 45 commits · Last activity 2025-04-02

Stars over time

2024-04-23 · 42026-07-07 · 4

Repository practices

Upstream repositoryBeta

4 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/rhenkin/visxhclust on 2026-08-23.

Continuous integration (1)

GitHub Actions

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

21 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (20)

shiny shinyhelper shinycssloaders bsplus DT ggplot2 dplyr readr tidyrclusterfastcluster clValid dunn.test RColorBrewer dendextend ComplexHeatmap circlize patchwork knitr kableExtra

LinkingTo (0)

none

Suggests (2)

testthat rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

Rafael Henkin

Author, Maintainer

Authors (1)

Rafael Henkin

Author, Maintainer

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
1.1.0Latest
2023-03-17 · current release · diff ↗
unarchivedReturned to CRAN
2023-03-17
archivedRemoved from CRAN
2023-03-11
requires archived package 'clusterCrit'
R
R 4.2.0 released · 2022-04-22
1.0.0
2021-10-19
R
R 4.1.0 released · 2021-05-18

Package metadata

First published: 2021-10-19
Total releases: 2 / 5 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.5.0
Bundled data: 52 KB / 5 files
Download size: 3.5 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("visxhclust")

Format

Henkin, R. (2023). visxhclust: A Shiny App for Visual Exploration of Hierarchical Clustering (Version 1.1.0) [Computer software]. https://doi.org/10.32614/CRAN.package.visxhclust

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for visxhclust version 1.1.0 [Data set]. HJJB, LLC. Data release v2026-08-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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