vismi

0.9.5

Visual Diagnostics for Multiple Imputation

0packages depend

1.2Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Yongshi DengFirst published 2026-02-031 releasesCRAN page ↗GitHub ↗

A comprehensive suite of static and interactive visual diagnostics for assessing the quality of multiply-imputed data obtained from packages such as 'mixgb' and 'mice'. The package supports inspection of distributional characteristics, diagnostics based on masking observed values and comparing them with re-imputed values, and convergence diagnostics.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)

install.packages("vismi", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("agnesdeng/vismi")

Development version from agnesdeng/vismi. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-vismi

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-vismi

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

Health

CRAN checks

13OK

Slowest check: 5.8 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-05-02
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-25
11 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 149 wordsVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 23%

Downloads

1.2K

CRAN downloads in the past year

Rank #20,964 · ~3/day · ~101/mo

Releases R versions

Daily download trend is not available in this view yet.

18830 days

57890 days

1.2K1 year

Compare downloads with other packages →

Also on33 r2u

Repository

GitHub ↗ agnesdeng/vismi

2Stars

0Forks

0Open issues

0Open PRs

1Releases

39Commits

1Contributors

License GPL-3.0 · 39 commits · Last activity 2026-05-22

Stars over time

2025-01-02 · 22026-07-07 · 2

Repository practices

Upstream repositoryBeta

5 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/agnesdeng/vismi on 2026-07-19.

Continuous integration (1)

GitHub Actions

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

16 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.3.0

Imports (17)

cli data.table dplyr GGally ggplot2 ggtext gridExtra ggridges mixgb patchwork plotly purrr rlangstatsscales tidyr trelliscopejs

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Code Composition

R 4,703 (88%)Rd 618 (12%)

Code characteristics

Object systems

S31

Cyclomatic complexity: 3.0 median / 47 max

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

99 7 exported

Complexity

4.2 avg / 47 max

Call network

99 nodes / 107 edges

Call graph

Open call graph →

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Datasets

Bundled datasets · 2

Name	Class	Rows × Cols	Also ships in
newborn	tbl_df/tbl/data.frame	2,107 × 16	in 2 packages
nhanes3	tbl_df/tbl/data.frame	500 × 6	in 2 packages

People & History

People (2)

Maintainer (1)

Yongshi Deng

Author, Maintainer

Authors (1)

Yongshi Deng

Author, Maintainer

Other (1)

Thomas Lumley

Thesis advisor

Package Timeline

1 release. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.9.5Latest
2026-03-10 · current release
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2026-02-03
Total releases: 1 / 1 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 4.3.0
Bundled data: 67 KB / 4 files
Download size: 1.5 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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