R Observatory: Metrics for vimixr version 0.1.3

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

vimixr

0.1.3Package record

Collapsed Variational Inference for Dirichlet Process (DP) Mixture Model

0packages depend

4Kdownloads / year

22.9%test coverage

13/13flavors OK

Overview

About

Maintained by Annesh PalCRAN page ↗GitHub ↗Website ↗Issues ↗

Collapsed Variational Inference for a Dirichlet Process (DP) mixture model with unknown covariance matrix structure and DP concentration parameter. It enables efficient clustering of high-dimensional data with significantly improved computational speed than traditional MCMC methods. The package incorporates 8 parameterisations and corresponding prior choices for the unknown covariance matrix, from which the user can choose and apply accordingly.

Changes in 0.1.3

Updated CRAN submission.

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("vimixr", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("annesh07/vimixr")

Development version from annesh07/vimixr. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-vimixr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-vimixr

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-vimixr

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 5.1 min · r-devel-windows-x86_64

Status changes

OK13 OK2026-08-04
NOTE12 OK, 1 NOTE2026-08-01
OK12 OK2026-04-25
NOTE12 OK, 2 NOTE2026-04-22
ERROR11 OK, 2 NOTE, 1 ERROR2026-04-18

Show 1 earlier changeHide 1 earlier change

NOTE12 OK, 2 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.3

READMEYes · 116 wordsVignettesYes · 1 · dynamicNEWSYes · 67% structured · mentions 0.1.3Citation fileNoWebsiteYes · pkgdown

Help pages: 19
Examples that run: 100%1 run in a plain check
Exported functions with examples: 6%
Documented parameters: 99%
Return-value docs: 100%
Help pages citing references: 0%

Vignettes (1)

vimixr_userguide HTML

How these are measured

Downloads

4K

CRAN downloads in the past year

Rank #9,251 · ~11/day · ~330/mo

Releases R versions

Daily download trend is not available in this view yet.

43930 days

1K90 days

4K1 year

Compare downloads with other packages →

Also on259 r2u1 autocran

How downloads are counted

Repository

annesh07/vimixr ↗Account: annesh07

0Stars

0Forks

0Open issues

0Open PRs

1Releases

116Commits

2Commit identities

116 commits · Last activity 2026-09-09

Responsiveness

not measured

Releases over time

2026-07-07 · 02026-09-09 · 1

How these are measured

PracticesBeta

7 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/annesh07/vimixr on 2026-10-18.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Docs source (4)

README.Rmdpkgdown

GitHub Pages site last deployed 2026-09-09 · The repository has a site deploy workflow

pkgdown site last built 2026-09-09

CRAN release process (1)

cran-comments.md

How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies

12 external dependencies (excludes base and recommended)

Installing vimixr adds 25 packages (14 with compiled code, 23 MB of source tarballs). Heaviest: ggplot2 6.0 MB, patchwork 3.2 MB, Rcpp 1.8 MB.

Depends (0)

none

Imports (8)

ggplot2 patchwork Rcpp Rfast rlangparallelstatsirlba

LinkingTo (2)

Rcpp RcppEigen

Suggests (4)

knitr rmarkdown pbapply testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (2)

Annesh Pal

Author, Maintainer since 0.1.2 (2026)

Boris Hejblum

Author

Releases (2)

Pick two releases to compare their code metrics.

0.1.3Latest
record
2026-09-09 · current release · diff ↗ ·
added 3 exports
log_sum_exp, lower_tri_stats, sparse_cov_op
R
R 4.6.0 released · 2026-04-24
0.1.2
record
2026-01-12
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2026-01-12
Total releases: 2 / 1 yrs
License: MIT + file LICENSE OSI
Download size: 80 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("vimixr")

Format

Pal, A., & Hejblum, B. (2026). vimixr: Collapsed Variational Inference for Dirichlet Process (DP) Mixture Model (Version 0.1.3) [Computer software]. https://doi.org/10.32614/CRAN.package.vimixr

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for vimixr version 0.1.3 [Data set]. HJJB, LLC. Data release v2026-10-20. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-20, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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