tidypaleo

0.1.4

Tidy Tools for Paleoenvironmental Archives

0packages depend

5.7Kdownloads / year

96.9%test coverage

13/13checks pass

Overview

About

Maintained by Dewey DunningtonFirst published 2021-03-315 releasesCRAN page ↗GitHub ↗

Provides a set of functions with a common framework for age-depth model management, stratigraphic visualization, and common statistical transformations. The focus of the package is stratigraphic visualization, for which 'ggplot2' components are provided to reproduce the scales, geometries, facets, and theme elements commonly used in publication-quality stratigraphic diagrams. Helpers are also provided to reproduce the exploratory statistical summaries that are frequently included on stratigraphic diagrams. See Dunnington et al. (2021) doi:10.18637/jss.v101.i07.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("tidypaleo", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("paleolimbot/tidypaleo")

Development version from paleolimbot/tidypaleo. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-tidypaleo

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-tidypaleo

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-tidypaleo

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 5.9 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 6.73

96.9%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
WARNING2026-06-08
12 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 133 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 63%
Return-value docs: 92%
References docs: 18%

Downloads

5.7K

CRAN downloads in the past year

Rank #9,759 · ~16/day · ~479/mo

Releases R versions

Daily download trend is not available in this view yet.

33630 days

1.1K90 days

5.7K1 year

Compare downloads with other packages →

Also on127 r2u26 autocran

Repository

GitHub ↗ paleolimbot/tidypaleo

36Stars

10Forks

2Open issues

0Open PRs

5Releases

178Commits

4Contributors

178 commits · Last activity 2025-10-20 · 0% stars, 30d

Stars over time

2025-06-20 · 362026-07-07 · 36

Repository practices

Upstream repositoryBeta

6 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/paleolimbot/tidypaleo on 2026-07-19.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Show all practices

Lint, format, editor (1)

RStudio project

Coverage (1)

Codecov

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

22 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.4.0

Imports (15)

rlang tidyselect dplyr vctrs tibble scales ggplot2 (>= 3.0.0)styler purrr ggstance stringr withr tidyr (>= 1.0.2)digest rioja

LinkingTo (0)

none

Suggests (7)

testthat knitr rmarkdown vegan patchwork forcats vdiffr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

Dewey Dunnington

Author, Maintainer, Copyright holder

Authors (1)

Dewey Dunnington

Author, Maintainer, Copyright holder

Dewey Dunnington

Author, Maintainer, Copyright holder

Package Timeline

5 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.1.4Latest
2025-10-19 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
0.1.3
2023-01-18 · diff ↗
R
R 4.2.0 released · 2022-04-22
0.1.2
2022-02-24 · diff ↗
R
R 4.1.0 released · 2021-05-18
0.1.1
2021-04-07 · diff ↗
0.1.0
2021-03-31
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2021-03-31
Total releases: 5 / 5 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 3.4.0
Bundled data: 18 KB / 12 files
Download size: 1.8 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Paleontology

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