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symphony

Efficient and Precise Single-Cell Reference Atlas Mapping

v0.1.2 · Oct 30, 2025 · GPL (>= 3)

Description

Implements the Symphony single-cell reference building and query mapping algorithms and additional functions described in Kang et al <https://www.nature.com/articles/s41467-021-25957-x>.

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CRAN Check Status

14 OK
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Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies Rcpp harmony uwot irlba class purrr dplyr ggplot2 magrittr data.table tibble Matrix tidyr rlang RColorBrewer +1 more dependencies symphony

Version History

new 0.1.2 Mar 10, 2026
updated 0.1.2 ← 0.1.1 diff Oct 30, 2025
updated 0.1.1 ← 0.1.0 diff Jan 15, 2023
new 0.1.0 Aug 4, 2021