R Observatory: Metrics for ssMousetrack version 1.1.7

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

ssMousetrack

1.1.7Package record

Bayesian State-Space Modeling of Mouse-Tracking Experiments via Stan

0packages depend

3.1Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Antonio CalcagnìCRAN page ↗GitHub ↗Issues ↗

Estimates previously compiled state-space modeling for mouse-tracking experiments using the 'rstan' package, which provides the R interface to the Stan C++ library for Bayesian estimation.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("ssMousetrack", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("antcalcagni/ssMousetrack")

Development version from antcalcagni/ssMousetrack. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-ssmousetrack

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-ssMousetrack

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-ssMousetrack

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 25.6 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-04
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-07-29
ERROR12 OK, 1 ERROR2026-07-27
OK13 OK2026-06-09

Show 5 earlier changesHide 5 earlier changes

ERROR12 OK, 1 ERROR2026-06-08
OK12 OK2026-04-25
NOTE11 OK, 3 NOTE2026-04-22
ERROR10 OK, 3 NOTE, 1 ERROR2026-04-18
NOTE11 OK, 3 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.1.7

README· In the repository, left out of the releaseVignettesNoNEWSYes · 0% structuredCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 11includes a package overview page
Examples that run: 50%4 run in a plain check · 4 never run
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 9%

How these are measured

Downloads

3.1K

CRAN downloads in the past year

Rank #13,060 · ~9/day · ~260/mo

Releases R versions

Daily download trend is not available in this view yet.

28030 days

87390 days

3.1K1 year

Compare downloads with other packages →

Also on508 r2u7 autocran114 c2d4u

How downloads are counted

Repository

antonio-calcagni/ssMousetrack ↗Account: antonio-calcagni

Moved from antcalcagni/ssmousetrack.

0Stars

1Forks

2Open issues

0Open PRs

1Releases

24Commits

2Commit identities

state-space-modelmouse-trackingbayesian-data-analysis

License file reads as GPL-3.0 · 24 commits · Last activity 2025-03-16 · The default branch showed an older version (1.1.6) than CRAN on 2026-10-22

Responsiveness

How these are sampled

PRs merged (all time): 60%
Median days to close, 50 most recently updated closed issues: 0
Median days to close, 50 most recently updated closed PRs: 53

Forks over time

2023-02-09 · 12026-07-07 · 1

How these are measured

PracticesBeta

Checks run against github.com/antcalcagni/ssmousetrack on 2026-10-22.

No development-tooling practices detected in the upstream repository.

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

14 external dependencies (excludes base and recommended)

Installing ssMousetrack adds 52 packages (24 with compiled code, 46 MB of source tarballs). Heaviest: BH 14 MB, ggplot2 6.0 MB, loo 2.7 MB.

Depends (3)

R >= 3.4.0methodsRcpp

Imports (7)

rstan rstantools CircStats dtw ggplot2 cowplot RcppParallel

LinkingTo (6)

BH Rcpp RcppEigen rstan StanHeaders RcppParallel

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Antonio Calcagnì

Author, Maintainer since 1.1.0 (2018)

Massimiliano Pastore

Contributor

Releases (5)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
1.1.7Latest
record
2025-03-17 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
1.1.6
record
2023-04-05 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
1.1.5
record
2019-01-16 · diff ↗
unarchivedReturned to CRAN
2019-01-02
1.1.2
record
2019-01-02 · diff ↗
archivedRemoved from CRAN
2018-12-24
it fails to install on macOS
1.1.0
record
2018-12-23
R
R 3.5.0 released · 2018-04-23

Package metadata

First published: 2018-12-23
Total releases: 5 / 8 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 3.4.0
Bundled data: 43 KB / 2 files
Download size: 114 KB

Appears in task views

Bayesian Inference

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("ssMousetrack")

Format

Calcagnì, A., & Pastore, M. (2025). ssMousetrack: Bayesian State-Space Modeling of Mouse-Tracking Experiments via Stan (Version 1.1.7) [Computer software]. https://doi.org/10.32614/CRAN.package.ssMousetrack

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for ssMousetrack version 1.1.7 [Data set]. HJJB, LLC. Data release v2026-10-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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