R Observatory: Metrics for sendigR version 1.0.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

sendigR

1.0.0Package record

Enable Cross-Study Analysis of 'CDISC' 'SEND' Datasets

0packages depend

2.9Kdownloads / year

0.0%test coverage

11/13flavors OK

Overview

About

Maintained by Wenxian WangCRAN page ↗GitHub ↗Issues ↗

A system enables cross study Analysis by extracting and filtering study data for control animals from 'CDISC' 'SEND' Study Repository. These data types are supported: Body Weights, Laboratory test results and Microscopic findings. These database types are supported: 'SQLite' and 'Oracle'.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("sendigR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("phuse-org/sendigR")

Development version from phuse-org/sendigR. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-sendigr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-sendigR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-sendigR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

2NOTE11OK

Check messages

NOTEdependencies in R coder-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Namespace in Imports field not imported from:
  ‘reticulate’
All declared Imports should be used.

CRAN check page ↗

Slowest check: 1.6 min · r-oldrel-windows-x86_64

Status changes

NOTE11 OK, 2 NOTE2026-06-09
ERROR10 OK, 2 NOTE, 1 ERROR2026-06-08
NOTE12 OK, 2 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.0.0

READMEYes · 505 wordsVignettesYes · 2 · dynamicNEWSNoCitation fileNo

Help pages: 21
Examples that run: 0%20 never run
Exported functions with examples: 95%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 0%

Vignettes (2)

Introduction to sendigR HTML
Using xptcleaner HTML

How these are measured

Downloads

2.9K

CRAN downloads in the past year

Rank #17,520 · ~8/day · ~239/mo

Releases R versions

Daily download trend is not available in this view yet.

28530 days

73190 days

2.9K1 year

Compare downloads with other packages →

Also on64 r2u3 autocran

How downloads are counted

Repository

phuse-org/sendigr ↗Organization: phuse-org

14Stars

5Forks

8Open issues

0Open PRs

0Releases

358Commits

15Commit identities

358 commits · Last activity 2025-03-06 · 0% stars, 30d · Default branch at 1.0.2, ahead of CRAN 1.0.0 (checked 2026-10-18) · Discussions: 2 posts

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: 16
Median days to close, 50 most recently updated closed PRs: 0

Stars over time

2024-09-30 · 122026-07-07 · 14

How these are measured

PracticesBeta

6 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/phuse-org/sendigr on 2026-10-18.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows

Docs source (3)

pkgdown

GitHub Pages site last deployed 2025-01-30 · The repository has a site deploy workflow

Reproducibility and dev environment (1)

data-raw/

How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies

25 external dependencies (excludes base and recommended)

Installing sendigR adds 117 packages (62 with compiled code, 93 MB of source tarballs). Heaviest: stringi 11 MB, ggplot2 6.0 MB, data.table 5.7 MB.

Depends (1)

R >= 4.1.0

Imports (20)

RSQLite data.table readxl magrittr xfun stringr DescTools parsedate shiny shinydashboard htmltools DT dplyr ggplot2 Hmisc haven plotly cicerone reticulate sjlabelled

LinkingTo (0)

none

Suggests (5)

knitr rmarkdown logr shinycssloaders testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (11)

Wenxian Wang

Maintainer since 1.0.0 (2022), Author

Author

Author

Author

Author

Author

Author

Author

Author

Author

Copyright holder

Releases (1)

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
1.0.0Latest
record
2022-08-18 · current release
R
R 4.2.0 released · 2022-04-22

Package metadata

First published: 2022-08-18
Total releases: 1 / 4 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.1.0
Download size: 4.7 MB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("sendigR")

Format

Wang, W., BioCelerate, Ahmed, C., Ali, Y., Butler, S., Denieu, M., Houser, W., Larsen, B., Paisley, B., Rosentreter, M., & Snyder, K. (2022). sendigR: Enable Cross-Study Analysis of 'CDISC' 'SEND' Datasets (Version 1.0.0) [Computer software]. https://doi.org/10.32614/CRAN.package.sendigR

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for sendigR version 1.0.0 [Data set]. HJJB, LLC. Data release v2026-10-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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