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scregclust

Reconstructing the Regulatory Programs of Target Genes in scRNA-Seq Data

v0.2.4 · Apr 5, 2026 · GPL (>= 3)

Description

Implementation of the scregclust algorithm described in Larsson, Held, et al. (2024) <doi:10.1038/s41467-024-53954-3> which reconstructs regulatory programs of target genes in scRNA-seq data. Target genes are clustered into modules and each module is associated with a linear model describing the regulatory program.

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NOTE r-oldrel-macos-arm64

installed package size

installed size is 20.7Mb
  sub-directories of 1Mb or more:
    libs  20.2Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 21.1Mb
  sub-directories of 1Mb or more:
    libs  20.5Mb

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NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is 20.7Mb
  sub-directories of 1Mb or more:
    libs  20.2Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 21.1Mb
  sub-directories of 1Mb or more:
    libs  20.5Mb

Dependency Network

Dependencies Reverse dependencies Matrix reshape igraph cli prettyunits ggplot2 rlang Rcpp scregclust

Version History

updated 0.2.4 ← 0.2.3 diff Apr 5, 2026
updated 0.2.3 ← 0.2.2 diff Apr 5, 2026
new 0.2.2 Mar 10, 2026
updated 0.2.2 ← 0.2.1 diff Jul 26, 2025
updated 0.2.1 ← 0.2.0 diff Jul 23, 2025
updated 0.2.0 ← 0.1.10 diff Dec 5, 2024
new 0.1.10 Nov 20, 2024