R Observatory: Metrics for scSorter version 0.0.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2026-04-02. Its history is shown below.

Reason: policy violation. On Internet access

Details below reflect version 0.0.2, its last release before removal.

scSorter

0.0.2Package record

Implementation of 'scSorter' Algorithm

0packages depend

1.2Kdownloads / year

–test coverage

–flavors OK

Overview

About

Maintained by Jun LiCRAN page ↗

Implements the algorithm described in Guo, H., and Li, J., "scSorter: assigning cells to known cell types according to known marker genes". Cluster cells to known cell types based on marker genes specified for each cell type.

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/scSorter/scSorter_0.0.2.tar.gz"
pkgFile <- "scSorter_0.0.2.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (0.0.2) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Status changes

NOTE11 OK, 3 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.0.2

READMENoVignettesYes · 1 · dynamicNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 9 (6 internal)
Examples that run: 100%1 run in a plain check
Exported functions with examples: 33%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 0%

How these are measured

Downloads

1.2K

CRAN downloads in the past year

Rank #25,730 · ~3/day · ~99/mo

Releases R versions

Daily download trend is not available in this view yet.

030 days

090 days

1.2K1 year

Compare downloads with other packages →

Also on77 r2u5 autocran51 c2d4u

How downloads are counted

Dependencies

Declared dependencies

2 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.6.0

Imports (1)

stats

LinkingTo (0)

none

Suggests (2)

knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Jun Li

Author, Maintainer since 0.0.1 (2020)

Hongyu Guo

Author

Releases (2)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
archivedRemoved from CRAN
2026-04-02
policy violation On Internet access
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
0.0.2
record
2021-03-17 · diff ↗ ·
added 2 exports
xfindvariable_genes, xnormalize_scData
0.0.1
record
2020-09-01
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2020-09-01
Total releases: 2 / 6 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.6.0
Download size: 291 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("scSorter")

Format

Guo, H., & Li, J. (n.d.). scSorter: Implementation of 'scSorter' Algorithm (Version 0.0.2) [Computer software]. Retrieved October 24, 2026, from https://CRAN.R-project.org/package=scSorter

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for scSorter version 0.0.2 [Data set]. HJJB, LLC. Data release v2026-10-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →