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scMetaTraj

Metabolic State Space and Trajectory Analysis for Single-Cell Data

v0.1.1 · Jan 27, 2026 · MIT + file LICENSE

Description

Provides a framework for modeling cellular metabolic states and continuous metabolic trajectories from single-cell RNA-seq data using pathway-level scoring. Enables lineage-restricted metabolic analysis, metabolic 'pseudotime' inference, module-level trend analysis, and visualization of metabolic state transitions.

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CRAN Check Status

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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies igraph ggplot2 uwot RANN Seurat dplyr tidyr scMetaTraj

Version History

new 0.1.1 Mar 10, 2026