scCATCH
Single Cell Cluster-Based Annotation Toolkit for Cellular Heterogeneity
v3.2.2
·
Apr 23, 2023
·
GPL (>= 3)
Description
An automatic cluster-based annotation pipeline based on evidence-based score by matching the marker genes with known cell markers in tissue-specific cell taxonomy reference database for single-cell RNA-seq data. See Shao X, et al (2020) <doi:10.1016/j.isci.2020.100882> for more details.
Downloads
472
Last 30 days
8207th
1.3K
Last 90 days
6.1K
Last year
Trend: +9.8% (30d vs prior 30d)
CRAN Check Status
2
NOTE
12
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Xin Shao<xin_shao@zju.edu.cn>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Xin",
family = "Shao",
role = c("aut", "cre"),
email = "xin_shao@zju.edu.cn")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Xin Shao<xin_shao@zju.edu.cn>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Xin",
family = "Shao",
role = c("aut", "cre"),
email = "xin_shao@zju.edu.cn")
as necessary.
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Xin Shao<xin_shao@zju.edu.cn>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Xin",
family = "Shao",
role = c("aut", "cre"),
email = "xin_shao@zju.edu.cn")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Xin Shao<xin_shao@zju.edu.cn>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Xin",
family = "Shao",
role = c("aut", "cre"),
email = "xin_shao@zju.edu.cn")
as necessary.