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salmonMSE

Management Strategy Evaluation for Salmon Species

v1.0.0 · Mar 20, 2026 · GPL (>= 3)

Description

Simulation tools to evaluate the long-term effects of salmon management strategies, including a combination of habitat, harvest, and habitat actions. The stochastic age-structured operating model accommodates complex life histories, including freshwater survival across early life stages, juvenile survival and fishery exploitation in the marine life stage, partial maturity by age class, and fitness impacts of hatchery programs on natural spawning populations. 'salmonMSE' also provides an age-structured conditioning model to develop operating models fitted to data.

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CRAN Check Status

14 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 28, 2026
WARNING 13 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE Mar 21, 2026
WARNING r-release-linux-x86_64

whether package can be installed

Found the following significant warnings:
  Warning: replacing previous import ‘RTMB::uniroot’ by ‘stats::uniroot’ when loading ‘salmonMSE’
See ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/salmonMSE.Rcheck/00install.out’ for details.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies abind MSEtool RTMB dplyr ggplot2 gsl reshape2 rlang rmarkdown salmonMSE

Version History

updated 1.0.0 ← 0.1.0 diff Mar 20, 2026
new 0.1.0 Mar 10, 2026