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runMCMCbtadjust

Runs Monte Carlo Markov Chain - With Either 'JAGS', 'nimble' or 'greta' - While Adjusting Burn-in and Thinning Parameters

v1.1.3 · Mar 24, 2026 · CECILL-2.1

Description

The function runMCMC_btadjust() returns a mcmc.list object which is the output of a Markov Chain Monte Carlo obtained - from either 'JAGS', 'nimble' or 'greta' - after adjusting burn-in and thinning parameters to meet pre-specified criteria in terms of convergence & effective sample size. Used with 'nimble', runMCMC_btadjust() allows extra calculations (e.g. information criteria for model comparison and goodness-of-fit p-values for model diagnosis).

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Trend: -3.2% (30d vs prior 30d)

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0

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30

Last 90 days

106

Last year

Trend: -100% (30d vs prior 30d)

autoCRAN

0

Last 7 days

12

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
NOTE 7 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 24, 2026
NOTE r-oldrel-macos-arm64

dependencies in R code

'library' or 'require' calls in package code:
  ‘nimble’ ‘nimbleAPT’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

Code

Structure

Lines of code

9,276

Files

48

Compiled share

0%

Has compiled src

No

Language breakdown

R 3,204 (34.5%)Tests 210 (2.3%)Docs 1,967 (21.2%)Vignettes 3,895 (42%)

API

Exported functions

2

Internal functions

0

Recent export changes

v1.1.0+1 findMCMC_strong_corrs

Testing & CI

Has tests

Yes

Test-to-code ratio

0.07

testthat edition

3

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

50%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

Yes

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

3.5.0

System requirements

C++ standard

License

CECILL-2.1

License flags

not SPDX, not OSI

History

Versions

10

First release

2023-06-19

Latest release

2026-03-24

Avg cadence

41 days

Cold removal rate

Dep drift

0

LOC over versions

v1.0.0: 2,549 LOCv1.0.1: 2,561 LOCv1.0.2: 2,561 LOCv1.0.3: 2,563 LOCv1.0.4: 2,563 LOCv1.0.5: 2,607 LOCv1.1.0: 4,279 LOCv1.1.1: 8,508 LOCv1.1.2: 8,914 LOCv1.1.3: 9,276 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies coda runMCMCbtadjust

Version History

10 tracked
new 1.1.3 Mar 24, 2026
update 1.1.2 ← 1.1.1 diff Aug 27, 2024
update 1.1.1 ← 1.1.0 diff Jun 4, 2024
update 1.1.0 ← 1.0.5 diff Apr 24, 2024
update 1.0.5 ← 1.0.4 diff Dec 12, 2023
update 1.0.4 ← 1.0.3 diff Nov 9, 2023
update 1.0.3 ← 1.0.2 diff Jul 19, 2023
update 1.0.2 ← 1.0.1 diff Jul 6, 2023
update 1.0.1 ← 1.0.0 diff Jun 28, 2023
new 1.0.0 Jun 18, 2023