rpyANTs

0.0.6

An Alternative Advanced Normalization Tools ('ANTs')

3packages depend

4.1Kdownloads / year

7.1%test coverage

13/13checks pass

Overview

About

Maintained by Zhengjia WangFirst published 2023-02-286 releasesCRAN page ↗GitHub ↗

Provides portable access from 'R' to biomedical image processing toolbox 'ANTs' by Avants et al. (2009) doi:10.54294/uvnhin via seamless integration with the 'Python' implementation 'ANTsPy'. Allows biomedical images to be processed in 'Python' and analyzed in 'R', and vice versa via shared memory. See 'citation("rpyANTs")' for more reference information.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("rpyANTs", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("dipterix/rpyANTs")

Development version from dipterix/rpyANTs. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-rpyants

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-rpyANTs

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-rpyANTs

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.4 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 0.09

7.1%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 955 wordsVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 90%
Return-value docs: 96%
References docs: 0%

Downloads

4.1K

CRAN downloads in the past year

Rank #14,069 · ~11/day · ~339/mo

Releases R versions

Daily download trend is not available in this view yet.

23630 days

78090 days

4.1K1 year

Compare downloads with other packages →

Also on138 r2u26 autocran

Repository

GitHub ↗ dipterix/rpyants

3Stars

0Forks

1Open issues

0Open PRs

1Releases

91Commits

1Contributors

antsbrainieegmrineuroimagingnormalizationpythonr

91 commits · Last activity 2026-06-06 · 0% stars, 30d

Stars over time

2023-03-24 · 12026-07-07 · 3

Repository practices

Upstream repositoryBeta

6 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/dipterix/rpyants on 2026-07-19.

Continuous integration (1)

GitHub Actions

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Docs source (1)

README.Rmd

Lint, format, editor (2)

lintrRStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

4 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (5)

grDevicesstatsrpymat reticulate RNifti

LinkingTo (0)

none

Suggests (1)

testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

3direct

1indirect

ieegio ravecore spant

Code & Tests

Code Composition

R 3,951 (73%)Rd 1,466 (27%)

Code characteristics

Object systems

S340

Cyclomatic complexity: 2.0 median / 17 max
Test cases: 3 / 0.09 per code line

Test coverage

Line coverage

Expression

0.1%

Tests / Examples

0.1% / 1% ex

Functions

83 28 exported

Complexity

3.4 avg / 17 max

Call network

83 nodes / 98 edges

Call graph

Open call graph →

Loading call graph…

Lowest coverage

83 functions

Function	Cyclo	Coverage
ants_apply_transforms exp	10	0%
ants_apply_transforms_to_points exp	9	0%
ants_available exp	2	0%
ants_motion_correction exp	6	0%
ants_plot exp	9	0%
ants_plot_grid exp	17	0%

People & History

People (1)

Maintainer (1)

Zhengjia Wang

Author, Maintainer

Authors (1)

Zhengjia Wang

Author, Maintainer

Package Timeline

6 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.0.6Latest
2026-01-11 · current release · diff ↗
0.0.5
2025-07-22 · diff ↗
R
R 4.5.0 released · 2025-04-11
0.0.4
2024-12-17 · diff ↗
R
R 4.4.0 released · 2024-04-24
0.0.3
2023-12-21 · diff ↗
0.0.2
2023-07-16 · diff ↗
R
R 4.3.0 released · 2023-04-21
0.0.1
2023-02-28
R
R 4.2.0 released · 2022-04-22

Package metadata

First published: 2023-02-28
Total releases: 6 / 3 yrs
License: Apache License 2.0 OSI
Download size: 257 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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