R Observatory: Metrics for rpcss version 0.1.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

rpcss

0.1.1Package record

Constitution of Core Collections by Principal Component Scoring Strategy

0packages depend

1.8Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by J. AravindCRAN page ↗GitHub ↗Website ↗Issues ↗

Generate a Core Collection with Principal Component Scoring Strategy (PCSS) using qualitative and/or quantitative trait data according to Hamon and Noirot (1990) https://www.documentation.ird.fr/hor/fdi:36506, Noirot et al. (1996) doi:10.2307/2527837 and Noirot et al. (2003) https://www.documentation.ird.fr/hor/fdi:010031886.

Changes in 0.1.1

UPDATED FUNCTIONS:

pcss.core, subset.pcss.core & coreplot.pcss.core - Added option to purposively include actions in the core collection (always.selected).

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("rpcss", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("aravind-j/rpcss")

Development version from aravind-j/rpcss. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-rpcss

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-rpcss

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-rpcss

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 3.1 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-04
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-06-09
ERROR12 OK, 1 ERROR2026-06-08
OK7 OK2026-04-30

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.1

READMEYes · 499 wordsVignettesNoNEWSYes · 100% structured · mentions 0.1.1Citation fileYes · computed when R runs itWebsiteYes · pkgdown

Help pages: 7 (2 internal)
Examples that run: 100%6 run in a plain check (6 of them under a condition)
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 14% with a bibliography file

How these are measured

Downloads

1.8K

CRAN downloads in the past year

Rank #17,088 · ~5/day · ~150/mo

Releases R versions

Daily download trend is not available in this view yet.

23530 days

74890 days

1.8K1 year

Compare downloads with other packages →

Also on70 r2u6 autocran

How downloads are counted

Repository

aravind-j/rpcss ↗Account: aravind-j

0Stars

0Forks

0Open issues

0Open PRs

2Releases

124Commits

2Commit identities

core-collectionsgenebankgermplasmpgrplant-genetic-resourcesr

124 commits · Last activity 2026-05-30 · Default branch at 0.1.1.9000, ahead of CRAN 0.1.1 (checked 2026-10-22)

Responsiveness

How these are sampled

PRs merged (all time): not measured
Median days to close, 50 most recently updated closed issues: 0
Median days to close, 50 most recently updated closed PRs: not measured

Releases over time

2025-02-18 · 12026-07-07 · 2

How these are measured

PracticesBeta

10 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/aravind-j/rpcss on 2026-10-22.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Docs source (4)

README.Rmdpkgdown

GitHub Pages site last deployed 2026-05-30 · The repository has a site deploy workflow

pkgdown site last built 2026-05-30

CRAN release process (1)

cran-comments.md

Research and citation (2)

CITATION.cffcodemeta.json

Show all practicesHide 1 practice

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

13 external dependencies (excludes base and recommended)

Installing rpcss adds 104 packages (55 with compiled code, 91 MB of source tarballs). Heaviest: stringi 11 MB, ggplot2 6.0 MB, bslib 5.6 MB.

Depends (1)

R >= 3.5.0

Imports (11)

dplyr FactoMineR ggplot2 ggrepel gslnls mathjaxrmethodsRdpackstatstidyrutils

LinkingTo (0)

none

Suggests (5)

EvaluateCore factoextra knitr rmarkdown pander

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (3)

J. Aravind

Author, Maintainer since 0.1.0 (2025)

Anju Mahendru Singh

Author

ICAR-NBGPR

Copyright holder

https://nbpgr.org.in/

Listed in earlier versions (1)

Singh

no longer listed · 0.1.1

Releases (2)

Pick two releases to compare their code metrics.

unarchivedReturned to CRAN
2026-04-29
0.1.1Latest
record
2026-04-29 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
archivedRemoved from CRAN
2025-04-05
email to the maintainer is undeliverable and does not use suggested package 'EvaluateCore' conditionally
0.1.0
record
2025-02-17
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2025-02-17
Total releases: 2 / 1 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 3.5.0
Download size: 630 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("rpcss")

The package provides a citation file that builds its entry when R runs it. Run citation() to see it.

The repository also keeps a CITATION.cff.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for rpcss version 0.1.1 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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