R Observatory: Metrics for rgudhi version 0.2.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2023-07-10. Its history is shown below.

Reason: issues were not corrected in time

Details below reflect version 0.2.0, its last release before removal.

rgudhi

0.2.0

An Interface to the GUDHI Library for Topological Data Analysis

0packages depend

–downloads / year

–test coverage

–checks pass

Overview

About

Maintained by Aymeric Stamm2 releasesCRAN page ↗GitHub ↗

Provides an interface to the GUDHI library which is a generic open source C++ library, with a Python interface, for topological data analysis (TDA) and higher dimensional geometry understanding. The library offers state-of-the-art data structures and algorithms to construct simplicial complexes and compute persistent homology.

Install

R (source archive)pak (dev)Ubuntu (r2u)openSUSE (OBS)

url <- "https://cran.r-project.org/src/contrib/Archive/rgudhi/rgudhi_0.2.0.tar.gz"
pkgFile <- "rgudhi_0.2.0.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (0.2.0) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("LMJL-Alea/rgudhi")

Development version from LMJL-Alea/rgudhi. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-rgudhi

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-rgudhi

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

CRAN check results are not tracked yet.

Code health

Yes

Tests · ratio 0.27

not tracked

Coverage

100%

Documentation · exports

12

Dependencies · direct

Documentation

READMEYes · 99 wordsVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 11%
References docs: 5%

Downloads

Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Also on77 r2u16 autocran

Dependencies

Declared dependencies

15 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (12)

cli curl dplyr fs ggplot2 purrr R6 Rdpack reticulate rlang tibble withr

LinkingTo (0)

none

Suggests (3)

covr testthat vdiffr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Aymeric Stamm

Author, Maintainer

Authors (1)

Aymeric Stamm

Author, Maintainer

Contributors (1)

GUDHI Editorial Board

Contributor

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.4.0 released · 2024-04-24
archivedRemoved from CRAN
2023-07-10
issues were not corrected in time
R
R 4.3.0 released · 2023-04-21
0.2.0
2023-03-24 · diff ↗
0.1.0
2023-01-19
R
R 4.2.0 released · 2022-04-22

Package metadata

Total releases: 2
License: MIT + file LICENSE OSI
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("rgudhi")

Format

Stamm, A., & GUDHI Editorial Board. (n.d.). rgudhi: An Interface to the GUDHI Library for Topological Data Analysis (Version 0.2.0) [Computer software]. Retrieved August 13, 2026, from https://CRAN.R-project.org/package=rgudhi

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for rgudhi version 0.2.0 [Data set]. HJJB, LLC. Data release v2026-08-13. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-13, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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