R Observatory: Metrics for respirometry version 2.0.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

respirometry

2.0.2

Tools for Conducting and Analyzing Respirometry Experiments

1packages depend

9Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Matthew A. BirkFirst published 2016-08-2320 releasesCRAN page ↗

Provides tools to enable the researcher to more precisely conduct respirometry experiments. Strong emphasis is on aquatic respirometry. Tools focus on helping the researcher setup and conduct experiments. Functions for analysis of resulting respirometry data are also provided. This package provides tools for intermittent, flow-through, and closed respirometry techniques.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("respirometry", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-respirometry

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-respirometry

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-respirometry

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 1.5 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

14

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 89%
Documented parameters: 98%
Return-value docs: 69%
References docs: 39%

Downloads

9K

CRAN downloads in the past year

Rank #4,999 · ~25/day · ~747/mo

Releases R versions

Daily download trend is not available in this view yet.

33630 days

1.6K90 days

9K1 year

Compare downloads with other packages →

Also on99 r2u14 autocran

Dependencies

Declared dependencies

10 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (14)

birk dplyrgraphicslubridate marelac measurements (>= 1.1.0)methodsminpack.lm plyr rlang seacarb segmentedstatsutils

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

respR

Code & Tests

People & History

People (1)

Maintainer (1)

Matthew A. Birk

Author, Maintainer

Authors (1)

Matthew A. Birk

Author, Maintainer

Listed in earlier versions (1)

Birk

no longer listed · 2.0.1 to 2.0.2

Package Timeline

20 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
2.0.2Latest
2025-04-18 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
2.0.1
2024-11-22 · diff ↗
2.0.0
2024-07-18 · diff ↗
R
R 4.4.0 released · 2024-04-24
1.5.0
2024-02-10 · diff ↗
1.4.0
2023-07-07 · diff ↗
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
1.3.0
2021-03-05 · diff ↗
1.2.1
2020-11-04 · diff ↗
1.2.0
2020-08-26 · diff ↗
1.1.0
2020-04-29 · diff ↗
R
R 4.0.0 released · 2020-04-24

Show 15 earlier events

1.0.2
2020-01-26 · diff ↗
1.0.1
2019-09-27 · diff ↗
1.0.0
2019-05-27 · diff ↗
R
R 3.6.0 released · 2019-04-26
0.7.0
2018-08-13 · diff ↗
R
R 3.5.0 released · 2018-04-23
0.6.0
2018-01-24 · diff ↗
0.5.0
2017-11-01 · diff ↗
0.4.0
2017-05-27 · diff ↗
R
R 3.4.0 released · 2017-04-21
0.3.1
2016-12-31 · diff ↗
0.3.0
2016-11-30 · diff ↗
0.2.0
2016-10-08 · diff ↗
0.1.0
2016-08-23
R
R 3.3.0 released · 2016-05-03

Package metadata

First published: 2016-08-23
Total releases: 20 / 10 yrs
License: GPL-3 OSI
Download size: 482 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("respirometry")

Format

Birk, M. A. (2025). respirometry: Tools for Conducting and Analyzing Respirometry Experiments (Version 2.0.2) [Computer software]. https://doi.org/10.32614/CRAN.package.respirometry

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for respirometry version 2.0.2 [Data set]. HJJB, LLC. Data release v2026-08-15. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-15, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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