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repeated

1.1.10Package record

Non-Normal Repeated Measurements Models

0packages depend
4.3Kdownloads / year
–test coverage
13/13flavors OK

Overview

About

Various functions to fit models for non-normal repeated measurements, such as Binary Random Effects Models with Two Levels of Nesting, Bivariate Beta-binomial Regression Models, Marginal Bivariate Binomial Regression Models, Cormack capture-recapture models, Continuous-time Hidden Markov Chain Models, Discrete-time Hidden Markov Chain Models, Changepoint Location Models using a Continuous-time Two-state Hidden Markov Chain, generalized nonlinear autoregression models, multivariate Gaussian copula models, generalized non-linear mixed models with one random effect, generalized non-linear mixed models using h-likelihood for one random effect, Repeated Measurements Models for Counts with Frailty or Serial Dependence, Repeated Measurements Models for Continuous Variables with Frailty or Serial Dependence, Ordinal Random Effects Models with Dropouts, marginal homogeneity models for square contingency tables, correlated negative binomial models with Kalman update. References include Lindsey's text books, JK Lindsey (2001) <isbn:10-0198508123> and JK Lindsey (1999) <isbn:10-0198505590>.

Changes in 1.1.10
  • changed some fortran source code for CRAN compliance.
  • see issue 25 on github

------------------------------------------------------------------------------

From NEWS.md in the release

Install

Health

CRAN checks
13OK
Slowest check: 3.4 min · r-devel-windows-x86_64
Status changes
  • OK13 OK2026-08-05
  • NOTE12 OK, 1 NOTE2026-08-01
  • OK13 OK2026-06-09
  • ERROR12 OK, 1 ERROR2026-06-08
  • OK14 OK2026-03-10
Advisories

none known

Documentation

In release 1.1.10
README· In the repository, left out of the releaseVignettesNoNEWSYes · 67% structured · mentions 1.1.10Citation fileNoWebsiteYes
Help pages
19
Examples that run
100%19 run in a plain check
Exported functions with examples
100%
Documented parameters
44%
Return-value docs
100%
Help pages citing references
32%

Downloads

4.3K
CRAN downloads in the past year
Rank #10,586 · ~12/day · ~359/mo
Daily download trend is not available in this view yet.
35030 days
96890 days
4.3K1 year
Compare downloads with other packages →
Also on375 r2u141 autocran92 c2d4u

Repository

0Stars
0Forks
3Open issues
0Open PRs
9Releases
184Commits
1Commit identities
License file reads as GPL-2.0 · 184 commits · Last activity 2024-10-03
Responsiveness
How these are sampled
PRs merged (all time)
100%
Median days to close, 50 most recently updated closed issues
1
Median days to close, 50 most recently updated closed PRs
0

Releases over time

2024-10-03 · 92026-07-07 · 9
PracticesBeta

4 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/swihart/repeated on 2026-10-11.

Continuous integration (2)
GitHub ActionsTravis CI (config file)
CRAN release process (2)
cran-comments.mdCRAN-SUBMISSION
How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies
1 external dependency (excludes base and recommended)

Installing repeated adds 1 package (1 with compiled code, 113 KB of source tarballs). Heaviest: rmutil 113 KB.

Depends (2)
R >= 1.4rmutil
Imports (0)
none
LinkingTo (0)
none
Suggests (0)
none
Enhances (0)
none
Reverse dependencies
0direct
0indirect

Nothing depends on this yet.

People & History

People (8)
Maintainer since at least 1.1.0 (2016), Author · added in 1.1.0
Author
Jim created this package, Bruce is maintaining the CRAN version
Contributor, Copyright holder · added in 1.1.0
Wrote calcs.c, calcs.h, calcs1.c, calcs1.h, calcs2.c, calcs2.h, calcs3.c, calcs3.h, calcs4.c, calcs4.h; defs.h; gaps.c…
Contributor, Copyright holder · added in 1.1.0
Wrote eigen.f.
Contributor, Copyright holder · added in 1.1.0
Wrote chidden.f, cphidden.f, hidden.f.
Contributor, Copyright holder · added in 1.1.0
Wrote Logit_bin_nest.f90 (in binnest.f).
Contributor, Copyright holder · added in 1.1.0
Wrote logitord.f.
Contributor, Copyright holder · added in 1.1.0
Wrote chidden.f, cphidden.f, hidden.f.
Releases (13)

Pick two releases to compare their code metrics.

  • R
    R 4.6.0 released · 2026-04-24
  • R
    R 4.5.0 released · 2025-04-11
  • 1.1.10Latest
    record
    2024-10-03 · current release · diff ↗
  • 1.1.9
    record
    2024-09-20 · diff ↗
  • unarchivedReturned to CRAN
    2024-06-14
  • 1.1.8
    record
    2024-06-14 · diff ↗ ·
    removed 1 export
    logitord
  • archivedRemoved from CRAN
    2024-06-13
    issues were not corrected in time Use of deleted Fortran features
  • R
    R 4.4.0 released · 2024-04-24
  • 1.1.7
    record
    2023-08-08 · diff ↗
  • R
    R 4.3.0 released · 2023-04-21
  • 1.1.6
    record
    2022-10-28 · diff ↗
  • R
    R 4.2.0 released · 2022-04-22
  • 1.1.5
    record
    2022-03-01 · diff ↗
  • 1.1.4
    record
    2022-02-01 · diff ↗
  • 1.1.3
    record
    2022-01-31 · diff ↗
  • R
    R 4.1.0 released · 2021-05-18
Show 36 earlier eventsHide 36 earlier events
  • R
    R 4.0.0 released · 2020-04-24
  • unarchivedReturned to CRAN
    2019-07-14
  • 1.1.2
    record
    2019-07-14 · diff ↗
  • archivedRemoved from CRAN
    2019-07-02
    check errors were not corrected in time LTO mismatches
  • R
    R 3.6.0 released · 2019-04-26
  • 1.1.1
    record
    2019-02-05 · diff ↗
  • R
    R 3.5.0 released · 2018-04-23
  • R
    R 3.4.0 released · 2017-04-21
  • 1.1.0
    record
    2017-02-06 · diff ↗ ·
    added 22 exports
    binnest, biv.betab, biv.binom, capture, catmiss, chidden, cphidden, gar, gausscop, glmm, gnlmix, gnlmm, gnlmm3, hidden, hnlmix, kalcount, kalseries, logitord, marg.hom, nbkal, setup, volatility
  • R
    R 3.3.0 released · 2016-05-03
  • R
    R 3.2.0 released · 2015-04-16
  • R
    R 3.1.0 released · 2014-04-10
  • R
    R 3.0.0 released · 2013-04-03
  • R
    R 2.15.0 released · 2012-03-30
  • R
    R 2.14.0 released · 2011-10-31
  • R
    R 2.13.0 released · 2011-04-13
  • R
    R 2.12.0 released · 2010-10-15
  • R
    R 2.11.0 released · 2010-04-22
  • R
    R 2.10.0 released · 2009-10-26
  • R
    R 2.9.0 released · 2009-04-17
  • R
    R 2.8.0 released · 2008-10-20
  • R
    R 2.7.0 released · 2008-04-22
  • R
    R 2.6.0 released · 2007-10-03
  • R
    R 2.5.0 released · 2007-04-24
  • R
    R 2.4.0 released · 2006-10-03
  • R
    R 2.3.0 released · 2006-04-24
  • R
    R 2.2.0 released · 2005-10-06
  • R
    R 2.1.0 released · 2005-04-18
  • R
    R 2.0.0 released · 2004-10-04
  • R
    R 1.9.0 released · 2004-04-12
  • R
    R 1.8.0 released · 2003-10-08
  • R
    R 1.7.0 released · 2003-04-16
  • R
    R 1.6.0 released · 2002-10-01
  • R
    R 1.5.0 released · 2002-04-29
  • 0.5
    record
    1999-07-01 · diff ↗
  • 0.4
    record
    1999-04-21

Package metadata

First published
1999-04-21
Total releases
13 / 27 yrs
License
GPL (>= 2) OSI
Minimum R
≥ 1.4
Download size
256 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("repeated")
Swihart, B., Cook, R., Garbow, B., Lindsey, J., MacDonald, I., Ten Have, T. R., Zharichenko, E., & Zucchini, W. (2024). repeated: Non-Normal Repeated Measurements Models (Version 1.1.10) [Computer software]. https://doi.org/10.32614/CRAN.package.repeated

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for repeated version 1.1.10 [Data set]. HJJB, LLC. Data release v2026-10-19. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-19, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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