R Observatory: Metrics for readMzXmlData version 2.8.4

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

readMzXmlData

2.8.4

Reads Mass Spectrometry Data in mzXML Format

2packages depend

6.8Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Sebastian GibbFirst published 2011-02-2121 releasesCRAN page ↗Codeberg ↗

Functions for reading mass spectrometry data in mzXML format.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("readMzXmlData", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-readmzxmldata

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-readMzXmlData

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-readMzXmlData

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 1.1 min · r-release-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

3

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 20%

Downloads

6.8K

CRAN downloads in the past year

Rank #4,916 · ~19/day · ~566/mo

Releases R versions

Daily download trend is not available in this view yet.

41230 days

1.6K90 days

6.8K1 year

Compare downloads with other packages →

Also on174 r2u137 autocran2.2K conda_forge324 bioconda24 c2d4u

Repository

Codeberg ↗ sgibb/readmzxmldata

Repository practices

Upstream repositoryBeta

Repository codeberg.org/sgibb/readmzxmldata is linked, but repository-practices checks have not run for it yet. Checks are GitHub-only for now.

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

3 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.2.0

Imports (3)

base64enc digest XML

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

2direct

1indirect

LipidMS MALDIquantForeign

Code & Tests

People & History

People (1)

Maintainer (1)

Sebastian Gibb

Author, Maintainer

Authors (1)

Sebastian Gibb

Author, Maintainer

Listed in earlier versions (1)

Jarek Tuszynski

no longer listed · 1.0.0 to 2.4

Package Timeline

21 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
2.8.4Latest
2025-10-17 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
2.8.3
2023-08-19 · diff ↗
R
R 4.3.0 released · 2023-04-21
2.8.2
2022-11-08 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
2.8.1
2015-09-16 · diff ↗
R
R 3.2.0 released · 2015-04-16

Show 23 earlier events

2.8
2014-09-28 · diff ↗
R
R 3.1.0 released · 2014-04-10
2.7
2013-07-03 · diff ↗
2.6
2013-04-03 · diff ↗
R
R 3.0.0 released · 2013-04-03
2.5
2012-12-09 · diff ↗
2.4
2012-09-13 · diff ↗
2.3
2012-05-06 · diff ↗
R
R 2.15.0 released · 2012-03-30
2.2.1
2012-03-09 · diff ↗
2.2
2012-01-31 · diff ↗
2.1.1
2012-01-28 · diff ↗
2.1
2012-01-26 · diff ↗
2.0.1
2012-01-12 · diff ↗
R
R 2.14.0 released · 2011-10-31
2.0
2011-10-04 · diff ↗
1.3.1
2011-09-24 · diff ↗
1.3
2011-05-29 · diff ↗
R
R 2.13.0 released · 2011-04-13
1.2
2011-03-21 · diff ↗
1.1
2011-02-22 · diff ↗
1.0.0
2011-02-21
R
R 2.12.0 released · 2010-10-15

Package metadata

First published: 2011-02-21
Total releases: 21 / 15 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 4.2.0
Download size: 279 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Chemometrics and Computational Physics

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("readMzXmlData")

Format

Gibb, S. (2025). readMzXmlData: Reads Mass Spectrometry Data in mzXML Format (Version 2.8.4) [Computer software]. https://doi.org/10.32614/CRAN.package.readMzXmlData

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for readMzXmlData version 2.8.4 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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