R Observatory: Metrics for reReg version 1.4.7

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

reReg

1.4.7

Recurrent Event Regression

2packages depend

5Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Sy Han (Steven) ChiouCRAN page ↗GitHub ↗Issues ↗

A comprehensive collection of practical and easy-to-use tools for regression analysis of recurrent events, with or without the presence of a (possibly) informative terminal event described in Chiou et al. (2023) doi:10.18637/jss.v105.i05. The modeling framework is based on a joint frailty scale-change model, that includes models described in Wang et al. (2001) doi:10.1198/016214501753209031, Huang and Wang (2004) doi:10.1198/016214504000001033, Xu et al. (2017) doi:10.1080/01621459.2016.1173557, and Xu et al. (2019) doi:10.5705/SS.202018.0224 as special cases. The implemented estimating procedure does not require any parametric assumption on the frailty distribution. The package also allows the users to specify different model forms for both the recurrent event process and the terminal event.

Changes in 1.4.7

Changed Calloc to R_Calloc

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("reReg", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("stc04003/reReg")

Development version from stc04003/reReg. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-rereg

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-reReg

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-reReg

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 4.7 min · r-devel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-04-22
ERROR13 OK, 1 ERROR2026-04-18
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.4.7

README· In the repository, left out of the releaseVignettes· In the repository, left out of the releaseNEWSYes · 100% structured · mentions 1.4.7Citation fileYes · cites a publication

Cites a JSS article

Help pages: 15 (1 internal)includes a package overview page
Examples that run: 89%8 run in a plain check · 1 never run
Exported functions with examples: 70%
Documented parameters: 95%
Return-value docs: 30%
Help pages citing references: 20%

How these are measured

Downloads

5K

CRAN downloads in the past year

Rank #5,967 · ~14/day · ~421/mo

Releases R versions

Daily download trend is not available in this view yet.

49430 days

1.4K90 days

5K1 year

Compare downloads with other packages →

Also on379 r2u8 autocran164 c2d4u

How downloads are counted

Repository

stc04003/rereg ↗Account: stc04003

23Stars

5Forks

3Open issues

0Open PRs

0Releases

446Commits

3Commit identities

r-package

446 commits · Last activity 2025-01-15

Responsiveness

How these are sampled

PRs merged (all time): 81%
Median days to close, 50 most recently updated closed issues: 8
Median days to close, 50 most recently updated closed PRs: 0

Stars over time

2025-02-06 · 222026-07-07 · 23

How these are measured

PracticesBeta

7 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/stc04003/rereg on 2026-10-11.

Continuous integration (3)

GitHub ActionsTravis CI (config file)AppVeyor

Docs source (2)

README.Rmd

GitHub Pages site last deployed 2025-07-21

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies

13 external dependencies (excludes base and recommended)

Installing reReg adds 34 packages (18 with compiled code, 31 MB of source tarballs). Heaviest: ggplot2 6.0 MB, data.table 5.7 MB, optimx 2.2 MB.

Depends (1)

R >= 4.2.0

Imports (14)

BB nleqslv dfoptim optimx SQUAREMsurvivaldirectlabels ggplot2MASSmethodsreda scam Rcpp rootSolve

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

2direct

0indirect

Imports 2

Depends, Imports or LinkingTo, most downloaded first

swjm SLCARE

How these are counted

Code & Tests

Datasets

People & History

People (2)

Sy Han (Steven) Chiou

Author, Maintainer · added in 1.1.4

Chiung-Yu Huang

Author · added in 1.1.5

Maintainer since 1.0-0 (2015)

Listed in earlier versions (1)

Sy Han Chiou

no longer listed · 1.0-0 to 1.1-3

Releases (19)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
1.4.7Latest
record
2024-10-07 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
1.4.6
record
2023-09-20 · diff ↗
R
R 4.3.0 released · 2023-04-21
1.4.5
record
2023-01-28 · diff ↗
1.4.4
record
2022-06-15 · diff ↗
R
R 4.2.0 released · 2022-04-22
1.4.3
record
2022-04-19 · diff ↗ ·
added 1 export
check_Recur
1.4.2
record
2022-01-17 · diff ↗
1.4.1
record
2021-09-16 · diff ↗ ·
added 2 exports
plotEvents.control, reReg.control
R
R 4.1.0 released · 2021-05-18
1.4.0
record
2021-04-15 · diff ↗ ·
removed 2 exports
plotMCF, simSC

added 3 exports
basebind, mcf, simGSC
1.3.0
record
2020-07-22 · diff ↗ ·
removed 1 export
plotCSM

added 1 export
plotMCF
R
R 4.0.0 released · 2020-04-24

Show 19 earlier eventsHide 19 earlier events

unarchivedReturned to CRAN
2019-12-01
1.2.1
record
2019-12-01 · diff ↗
archivedRemoved from CRAN
2019-11-09
because of memory-access errors
1.2.0
record
2019-11-08 · diff ↗ ·
removed 2 exports
is.reSurv, simDat

added 5 exports
%2%, %to%, Recur, is.Recur, simSC
R
R 3.6.0 released · 2019-04-26
1.1.6
record
2018-10-22 · diff ↗
1.1.5
record
2018-10-09 · diff ↗ ·
added 2 exports
plotCSM, simDat
unarchivedReturned to CRAN
2018-05-30
1.1.4
record
2018-05-30 · diff ↗
archivedRemoved from CRAN
2018-05-27
depends on archived package 'aftgee'
1.1-3
record
2018-05-25 · diff ↗
R
R 3.5.0 released · 2018-04-23
1.1-2
record
2018-04-17 · diff ↗
1.1-1
record
2018-02-01 · diff ↗
1.1-0
record
2017-12-22 · diff ↗ ·
removed 1 export
plot.reReg

added 3 exports
plotRate, plotHaz, plotEvents
R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
1.0-0
record
2015-10-31
R
R 3.2.0 released · 2015-04-16

Package metadata

First published: 2015-10-31
Total releases: 19 / 11 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 4.2.0
Bundled data: 13 KB / 1 file
Download size: 74 KB

Appears in task views

Survival Analysis

Cite

Cite this package

Run in R for the authors' entry:

citation("reReg")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.18637/jss.v105.i05.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for reReg version 1.4.7 [Data set]. HJJB, LLC. Data release v2026-10-17. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-17, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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