R Observatory: Metrics for ravepipeline version 0.2.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

ravepipeline

0.2.0Package record

Reproducible Pipeline Infrastructure for Neuroscience

1packages depend

6.8Kdownloads / year

24.3%test coverage

13/13flavors OK

Overview

About

Maintained by Zhengjia WangCRAN page ↗GitHub ↗Website ↗Issues ↗

Defines the underlying pipeline structure for reproducible neuroscience, adopted by 'RAVE' (reproducible analysis and visualization of intracranial electroencephalography); provides high-level class definition to build, compile, set, execute, and share analysis pipelines. Both R and 'Python' are supported, with 'Markdown' and 'shiny' dashboard templates for extending and building customized pipelines. See the full documentations at https://rave.wiki; to cite us, check out our paper by Magnotti, Wang, and Beauchamp (2020, doi:10.1016/j.neuroimage.2020.117341), or run citation("ravepipeline") for details.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("ravepipeline", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("dipterix/ravepipeline")

Development version from dipterix/ravepipeline. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-ravepipeline

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-ravepipeline

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-ravepipeline

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.8 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-03-21
ERROR13 OK, 1 ERROR2026-03-16
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.2.0

READMEYes · 147 wordsVignettesNoNEWSYes · 100% structured · mentions 0.2.0Citation fileYes · cites a publicationWebsiteYes · pkgdown

Help pages: 35 (1 internal)
Examples that run: 81%21 run in a plain check (1 of them under a condition) · 5 never run
Exported functions with examples: 74%
Documented parameters: 90%
Return-value docs: 77%
Help pages citing references: 0%

How these are measured

Downloads

6.8K

CRAN downloads in the past year

Rank #8,086 · ~19/day · ~567/mo

Releases R versions

Daily download trend is not available in this view yet.

39330 days

1.1K90 days

6.8K1 year

Compare downloads with other packages →

Also on91 r2u5 autocran

How downloads are counted

Repository

dipterix/ravepipeline ↗Account: dipterix

0Stars

0Forks

0Open issues

0Open PRs

2Releases

153Commits

1Commit identities

153 commits · Last activity 2026-10-10 · Default branch at 0.2.0.14, ahead of CRAN 0.2.0 (checked 2026-10-21)

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: 0
Median days to close, 50 most recently updated closed PRs: 0

Releases over time

2026-05-29 · 12026-08-22 · 2

How these are measured

PracticesBeta

9 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/dipterix/ravepipeline on 2026-10-21.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Governance and community (1)

Issue templates

Docs source (3)

pkgdown

GitHub Pages site last deployed 2026-10-10 · The repository has a site deploy workflow

pkgdown site last built 2026-10-10

CRAN release process (1)

cran-comments.md

Show all practicesHide 1 practice

Lint, format, editor (2)

lintrRStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

35 external dependencies (excludes base and recommended)

Installing ravepipeline adds 46 packages (27 with compiled code, 27 MB of source tarballs). Heaviest: data.table 5.7 MB, igraph 4.8 MB, promises 3.1 MB.

Depends (0)

none

Imports (23)

grDevicesgraphicsstatstoolsutilsbase64enc callr cli digest fastmap future fst glue jsonlite knitr promises R6 remotes rlang targets uuid yaml logger

LinkingTo (0)

none

Suggests (17)

ellmer dipsaus filearray future.apply globals ieegio pkgsearch rpymat rmarkdown rstudioapi shidashi threeBrain testthat visNetwork later shiny mirai

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

Imports 1

Depends, Imports or LinkingTo, most downloaded first

ravecore

How these are counted

Code & Tests

People & History

People (5)

Contributor, res

Contributor, res

Contributor, res

Trustees of University of Pennsylvania

Copyright holder

Copyright Holder

Releases (4)

Pick two releases to compare their code metrics.

0.2.0Latest
record
2026-08-22 · current release · diff ↗ ·
added 9 exports
CONTINUOUS_COLORMAPS, DISCRETE_COLORMAPS, KEY_MISSING, define_preference_continuous_colormap, define_preference_discrete_colormap, define_preference_logical, define_preference_multichoice, pkg_available_reports, pkg_build_report
0.1.0
record
2026-05-30 · diff ↗ ·
added 6 exports
html_embed_read, html_embed_write, pipeline_export_wizard, pipeline_import_wizard, pipeline_plot_data, pipeline_translate_settings
R
R 4.6.0 released · 2026-04-24
0.0.3
record
2025-09-10 · diff ↗ ·
added 31 exports
PipelineCollections, PipelineResult, PipelineTools, RAVEFileArray, RAVESerializable, as.promise, base64_decode, base64_encode, base64_plot, base64_urldecode, base64_urlencode, check_job, digest, dir_create2, lapply_jobs, load_yaml, logger, logger_error_condition, logger_threshold, pipeline_collection, rave_progress, rave_serialize_impl, rave_serialize_refhook, rave_unserialize_impl, rave_unserialize_refhook, remove_job, resolve_job, save_yaml, set_logger_path, start_job and 1 more
R
R 4.5.0 released · 2025-04-11
0.0.1
record
2025-03-13
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2025-03-13
Total releases: 4 / 1 yrs
License: MIT + file LICENSE OSI
Copyright: Trustees of University of Pennsylvania owns the copyright of the package unless otherwise stated. Zhengjia Wang owns the copyright of all the low-level functions included in 'R/common.R', 'R/fastmap2', 'R/fastqueue2.R', 'R/filesys.R', 'R/fst.R', 'R/json.R', 'R/os_info.R', 'R/parallel.R', 'R/progress.R', 'R/simplelocker.R', 'R/yaml.R', and all the template files under 'inst/rave-pipelines' and 'inst/rave-modules', these files are licensed under 'MIT'.
Download size: 216 KB

Cite

Cite this package

Run in R for the authors' entry:

citation("ravepipeline")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.1016/j.neuroimage.2020.117341.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for ravepipeline version 0.2.0 [Data set]. HJJB, LLC. Data release v2026-10-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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