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rPDBapi

A Comprehensive Interface for Accessing the Protein Data Bank

v3.0.1 · Mar 7, 2026 · MIT + file LICENSE

Description

Provides an R interface to the 'RCSB' Protein Data Bank ('PDB') Search and Data APIs (<https://www.rcsb.org/>). Supports full-text, attribute, sequence, motif, structure, and chemical searches; retrieval of entry-, assembly-, polymer-entity-, and chemical-component-level metadata; and conversion of API responses into analysis-ready tables and typed R objects for reproducible structural bioinformatics workflows.

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CRAN Check Status

14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies dplyr purrr httr jsonlite xml2 bio3d magrittr rPDBapi

Version History

new 3.0.1 Mar 10, 2026
updated 3.0.1 ← 3.0.0 diff Mar 7, 2026
updated 3.0.0 ← 2.1.2 diff Mar 6, 2026
updated 2.1.2 ← 2.1.1 diff Oct 28, 2025
updated 2.1.1 ← 2.1 diff Oct 18, 2024
updated 2.1 ← 2.0 diff Sep 5, 2024
updated 2.0 ← 1.3 diff Sep 3, 2024
updated 1.3 ← 1.2 diff Jun 5, 2024
updated 1.2 ← 1.1 diff May 15, 2024
updated 1.1 ← 1.0 diff Mar 28, 2024
new 1.0 Jan 16, 2024