rNeighborQTL
Interval Mapping for Quantitative Trait Loci Underlying Neighbor Effects
v1.1.2
·
Apr 8, 2021
·
GPL-3
Description
To enable quantitative trait loci mapping of neighbor effects, this package extends a single-marker regression to interval mapping. The theoretical background of the method is described in Sato et al. (2021) <doi:10.1093/g3journal/jkab017>.
Downloads
814
Last 30 days
4375th
2.4K
Last 90 days
8.9K
Last year
Trend: -3.4% (30d vs prior 30d)
CRAN Check Status
14
NOTE
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | NOTE |
| r-devel-linux-x86_64-fedora-gcc | NOTE |
| r-devel-macos-arm64 | NOTE |
| r-devel-windows-x86_64 | NOTE |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | NOTE |
| r-release-linux-x86_64 | NOTE |
| r-release-macos-arm64 | NOTE |
| r-release-macos-x86_64 | NOTE |
| r-release-windows-x86_64 | NOTE |
Check details (18 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Yasuhiro Sato <sato.yasuhiro.36c@kyoto-u.jp>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead.
NOTE
r-devel-linux-x86_64-debian-clang
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Yasuhiro Sato <sato.yasuhiro.36c@kyoto-u.jp>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead.
NOTE
r-devel-linux-x86_64-debian-gcc
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-devel-linux-x86_64-fedora-clang
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-devel-linux-x86_64-fedora-clang
dependencies in R code
Namespace in Imports field not imported from: ‘qtl’ All declared Imports should be used.
NOTE
r-devel-linux-x86_64-fedora-gcc
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-devel-linux-x86_64-fedora-gcc
dependencies in R code
Namespace in Imports field not imported from: ‘qtl’ All declared Imports should be used.
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-devel-windows-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-oldrel-macos-arm64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-oldrel-macos-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-patched-linux-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) decompose_genoprobs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eff_neighbor.Rd:47: Lost braces in \itemize; \value
...[truncated]...
bor.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) int_neighbor.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) scan_neighbor.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
Check History
NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Yasuhiro Sato <sato.yasuhiro.36c@kyoto-u.jp>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Yasuhiro Sato <sato.yasuhiro.36c@kyoto-u.jp>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead.
NOTE
r-devel-linux-x86_64-fedora-clang
dependencies in R code
Namespace in Imports field not imported from: ‘qtl’ All declared Imports should be used.
NOTE
r-devel-linux-x86_64-fedora-gcc
dependencies in R code
Namespace in Imports field not imported from: ‘qtl’ All declared Imports should be used.
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \i
...[truncated]...
.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-devel-windows-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \i
...[truncated]...
.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-patched-linux-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \i
...[truncated]...
.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \i
...[truncated]...
.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \i
...[truncated]...
.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \i
...[truncated]...
.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \i
...[truncated]...
.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-oldrel-macos-arm64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \i
...[truncated]...
.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-oldrel-macos-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \i
...[truncated]...
.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) calc_pve.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) calc_pve.Rd:43: Lost braces in \itemize; \value handles \i
...[truncated]...
.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sim_nei_qtl.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly