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polyqtlR

QTL Analysis in Autopolyploid Bi-Parental F1 Populations

v0.1.1 · Jan 9, 2024 · GPL-3
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Description

Quantitative trait loci (QTL) analysis and exploration of meiotic patterns in autopolyploid bi-parental F1 populations. For all ploidy levels, identity-by-descent (IBD) probabilities can be estimated. Significance thresholds, exploring QTL allele effects and visualising results are provided. For more background and to reference the package see <doi:10.1093/bioinformatics/btab574>.

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r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
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r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (3 non-OK)
NOTE r-oldrel-macos-arm64

installed package size

installed size is  6.3Mb
  sub-directories of 1Mb or more:
    data   2.6Mb
    doc    1.8Mb
    libs   1.4Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  6.3Mb
  sub-directories of 1Mb or more:
    data   2.6Mb
    doc    1.8Mb
    libs   1.5Mb
NOTE r-oldrel-windows-x86_64

installed package size

installed size is  5.8Mb
  sub-directories of 1Mb or more:
    data   2.6Mb
    doc    1.8Mb

Check History

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is  6.3Mb
  sub-directories of 1Mb or more:
    data   2.6Mb
    doc    1.8Mb
    libs   1.4Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  6.3Mb
  sub-directories of 1Mb or more:
    data   2.6Mb
    doc    1.8Mb
    libs   1.5Mb
NOTE r-oldrel-windows-x86_64

installed package size

installed size is  5.8Mb
  sub-directories of 1Mb or more:
    data   2.6Mb
    doc    1.8Mb

Dependency Network

Dependencies Reverse dependencies abind doParallel foreach Hmisc knitr nlme RColorBrewer Rcpp reshape2 polyqtlR

Version History

new 0.1.1 Mar 10, 2026
updated 0.1.1 ← 0.1.0 diff Jan 8, 2024
updated 0.1.0 ← 0.0.9 diff Jan 7, 2024
updated 0.0.9 ← 0.0.8 diff Feb 1, 2022
updated 0.0.8 ← 0.0.7 diff Jan 19, 2022
updated 0.0.7 ← 0.0.6 diff Dec 8, 2021
updated 0.0.6 ← 0.0.5 diff Jun 22, 2021
updated 0.0.5 ← 0.0.4 diff Mar 10, 2021
new 0.0.4 Dec 15, 2020