R Observatory: Metrics for pldamixture version 0.1.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

pldamixture

0.1.1

Post-Linkage Data Analysis Based on Mixture Modelling

0packages depend

6.1Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Priyanjali BukkeFirst published 2024-03-052 releasesCRAN page ↗GitHub ↗

Perform inference in the secondary analysis setting with linked data potentially containing mismatch errors. Only the linked data file may be accessible and information about the record linkage process may be limited or unavailable. Implements the 'General Framework for Regression with Mismatched Data' developed by Slawski et al. (2023) doi:10.48550/arXiv.2306.00909. The framework uses a mixture model for pairs of linked records whose two components reflect distributions conditional on match status, i.e., correct match or mismatch. Inference is based on composite likelihood and the Expectation-Maximization (EM) algorithm. The package currently supports Cox Proportional Hazards Regression (right-censored data only) and Generalized Linear Regression Models (Gaussian, Gamma, Poisson, and Logistic (binary models only)). Information about the underlying record linkage process can be incorporated into the method if available (e.g., assumed overall mismatch rate, safe matches, predictors of match status, or predicted probabilities of correct matches).

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("pldamixture", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("bpriy/pldamixture")

Development version from bpriy/pldamixture. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-pldamixture

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-pldamixture

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-pldamixture

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 1.7 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

2

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 46%
Return-value docs: 100%
References docs: 50%

Downloads

6.1K

CRAN downloads in the past year

Rank #7,929 · ~17/day · ~512/mo

Releases R versions

Daily download trend is not available in this view yet.

13730 days

1.2K90 days

6.1K1 year

Compare downloads with other packages →

Also on99 r2u14 autocran

Repository

GitHub ↗ bpriy/pldamixture

3Stars

0Forks

3Open issues

0Open PRs

0Releases

40Commits

1Contributors

40 commits · Last activity 2025-12-24

Stars over time

2024-12-20 · 32026-07-07 · 3

Repository practices

Upstream repositoryBeta

2 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/bpriy/pldamixture on 2026-08-09.

Reproducibility and dev environment (1)

renv

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

0 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (2)

statssurvival

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (6)

Maintainer (1)

Priyanjali Bukke

Author, Maintainer

Authors (6)

Author, Maintainer

Author

Author

Author

Author

Author

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
0.1.1Latest
2024-06-07 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
0.1.0
2024-03-05
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2024-03-05
Total releases: 2 / 2 yrs
License: GPL-2 OSI
Minimum R: ≥ 3.5.0
Bundled data: 33 KB / 1 file
Download size: 53 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("pldamixture")

Format

Bukke, P., Ben-David, E., Diao, G., Slawski, M., Wang, Z., & West, B. T. (2024). pldamixture: Post-Linkage Data Analysis Based on Mixture Modelling (Version 0.1.1) [Computer software]. https://doi.org/10.32614/CRAN.package.pldamixture

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for pldamixture version 0.1.1 [Data set]. HJJB, LLC. Data release v2026-08-11. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-11, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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