phyloseqGraphTest
Graph-Based Permutation Tests for Microbiome Data
v0.1.1
·
Feb 5, 2024
·
CC0
Description
Provides functions for graph-based multiple-sample testing and visualization of microbiome data, in particular data stored in 'phyloseq' objects. The tests are based on those described in Friedman and Rafsky (1979) <http://www.jstor.org/stable/2958919>, and the tests are described in more detail in Callahan et al. (2016) <doi:10.12688/f1000research.8986.1>.
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CRAN Check Status
2
NOTE
12
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Julia Fukuyama <julia.fukuyama@gmail.com>’
No Authors@R field in DESCRIPTION.
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Authors@R: person(given = "Julia",
family = "Fukuyama",
role = c("aut", "cre"),
email = "julia.fukuyama@gmail.com")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Julia Fukuyama <julia.fukuyama@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Julia",
family = "Fukuyama",
role = c("aut", "cre"),
email = "julia.fukuyama@gmail.com")
as necessary.
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 16, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Julia Fukuyama <julia.fukuyama@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Julia",
family = "Fukuyama",
role = c("aut", "cre"),
email = "julia.fukuyama@gmail.com")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Julia Fukuyama <julia.fukuyama@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Julia",
family = "Fukuyama",
role = c("aut", "cre"),
email = "julia.fukuyama@gmail.com")
as necessary.
ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 12, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Julia Fukuyama <julia.fukuyama@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Julia",
family = "Fukuyama",
role = c("aut", "cre"),
email = "julia.fukuyama@gmail.com")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Julia Fukuyama <julia.fukuyama@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Julia",
family = "Fukuyama",
role = c("aut", "cre"),
email = "julia.fukuyama@gmail.com")
as necessary.
ERROR
r-devel-linux-x86_64-fedora-clang
package dependencies
Package required but not available: ‘phyloseq’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 11, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Julia Fukuyama <julia.fukuyama@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Julia",
family = "Fukuyama",
role = c("aut", "cre"),
email = "julia.fukuyama@gmail.com")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Julia Fukuyama <julia.fukuyama@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Julia",
family = "Fukuyama",
role = c("aut", "cre"),
email = "julia.fukuyama@gmail.com")
as necessary.
ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Julia Fukuyama <julia.fukuyama@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Julia",
family = "Fukuyama",
role = c("aut", "cre"),
email = "julia.fukuyama@gmail.com")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Julia Fukuyama <julia.fukuyama@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Julia",
family = "Fukuyama",
role = c("aut", "cre"),
email = "julia.fukuyama@gmail.com")
as necessary.
ERROR
r-patched-linux-x86_64
package dependencies
Package required but not available: ‘phyloseq’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.