pharmaversesdtm

1.5.0

SDTM Test Data for the 'Pharmaverse' Family of Packages

10packages depend

32Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Lina PatilFirst published 2023-09-0510 releasesCRAN page ↗GitHub ↗

A set of Study Data Tabulation Model (SDTM) datasets from the Clinical Data Interchange Standards Consortium (CDISC) pilot project used for testing and developing Analysis Data Model (ADaM) datasets inside the pharmaverse family of packages. SDTM dataset specifications are described in the CDISC SDTM implementation guide, accessible by creating a free account on https://www.cdisc.org/.

Install

R (CRAN)pak (dev)Ubuntu (r2u)openSUSE (OBS)

install.packages("pharmaversesdtm", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("pharmaverse/pharmaversesdtm")

Development version from pharmaverse/pharmaversesdtm. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-pharmaversesdtm

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-pharmaversesdtm

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.4 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

Dependencies · direct

Check history

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 944 wordsVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: not tracked
Documented parameters: not tracked
Return-value docs: not tracked
References docs: 0%

Downloads

32K

CRAN downloads in the past year

Rank #2,963 · ~88/day · ~2.7K/mo

Releases R versions

Daily download trend is not available in this view yet.

1.3K30 days

5.1K90 days

32K1 year

Compare downloads with other packages →

Also on188 r2u26 autocran

Repository

GitHub ↗ pharmaverse/pharmaversesdtm

38Stars

16Forks

3Open issues

0Open PRs

10Releases

660Commits

48Contributors

License Apache-2.0 · 660 commits · Last activity 2026-07-14 · +2.7% stars, 30d

Stars over time

2026-07-14 · 372026-07-17 · 38

Repository practices

Upstream repositoryBeta

7 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/pharmaverse/pharmaversesdtm on 2026-07-19.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (2)

data-raw/Dev Container

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

Show all practices

Governance and community (2)

Issue templatesCODEOWNERS

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

17 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (0)

none

LinkingTo (0)

none

Suggests (17)

admiraldev cli covr devtools DT htmltools knitr lintr metatools pkgdown reactable rmarkdown roxygen2 spelling testthat usethis yaml

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

10direct

0indirect

pharmaversesdtmjnj admiral admiralmetabolic admiralneuro admiralonco admiralophtha admiralpeds admiralvaccine metatools pharmaverseraw

Code & Tests

Datasets

People & History

People (13)

Maintainer (1)

Lina Patil

Author, Maintainer · added in 1.3.0

Authors (10)

Lina Patil

Author, Maintainer · added in 1.3.0

Stefan Bundfuss

Author

Kristin Dahnert

Author · added in 1.4.0

Fanny Gautier

Author · added in 1.3.0

Edoardo Mancini

Author

Tomoyuki Namai

Author · added in 1.3.0

Vinh Nguyen

Author · added in 1.2.0

Kiran Peddamudium

Author · added in 1.5.0

Gerardo Jose Rodriguez

Author · added in 1.4.1

Vladyslav Shuliar

Author · added in 1.1.0

Cytel Inc.

F. Hoffmann-La Roche AG

GlaxoSmithKline LLC

Funders (3)

Cytel Inc.

F. Hoffmann-La Roche AG

GlaxoSmithKline LLC

Listed in earlier versions (5)

Gayatri G

no longer listed · 0.1.1 to 1.3.0

Pooja Kumari

no longer listed · 0.1.1 to 1.3.0

Kangjie Zhang

no longer listed · 0.1.1 to 1.3.0

Zelos Zhu

no longer listed · 0.1.1 to 1.3.0

Sadchla Mascary

no longer listed · 1.0.0 to 1.3.0

Package Timeline

10 releases. Pick two to compare their code metrics. R releases are shown for context.

1.5.0Latest
2026-07-02 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
1.4.1
2026-03-30 · diff ↗
1.4.0
2026-01-10 · diff ↗
1.3.1
2025-08-21 · diff ↗
1.3.0
2025-07-04 · diff ↗
R
R 4.5.0 released · 2025-04-11
1.2.0
2025-01-23 · diff ↗
1.1.0
2024-10-25 · diff ↗
1.0.0
2024-06-06 · diff ↗
R
R 4.4.0 released · 2024-04-24
0.2.0
2023-12-01 · diff ↗
0.1.1
2023-09-05
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2023-09-05
Total releases: 10 / 3 yrs
License: Apache License (>= 2.0)
Minimum R: ≥ 3.5.0
Bundled data: 999 KB / 64 files
Download size: 1.0 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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