R Observatory: Metrics for perumammals version 0.0.0.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

perumammals

0.0.0.2Package record

Taxonomic Backbone and Name Validation Tools for Mammals of Peru

0packages depend

1.8Kdownloads / year

61.9%test coverage

13/13flavors OK

Overview

About

Maintained by Paul E. Santos AndradeCRAN page ↗GitHub ↗Website ↗Issues ↗

Provides a curated taxonomic backbone of mammal species recorded in Peru, based on the checklist published by Pacheco and collaborators (2021) doi:10.15381/rpb.v28i4.21019. The package includes standardized species data, occurrence records by ecological regions, endemic status, and tools for validating and matching scientific names through exact and approximate string procedures. It is designed as a lightweight and reliable reference for ecological, environmental, biogeographical, and conservation workflows that require verified species information for Peruvian mammals.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("perumammals", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("PaulESantos/perumammals")

Development version from PaulESantos/perumammals. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-perumammals

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-perumammals

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-perumammals

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 3.2 min · r-release-macos-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK12 OK, 1 FAILURE2026-06-08
ERROR12 OK, 1 ERROR2026-06-07
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.0.0.2

READMEYes · 848 wordsVignettesYes · 3 · dynamicNEWSNoCitation fileYes · cites a publicationWebsiteYes · pkgdown

Help pages: 55 (34 internal)
Examples that run: 100%16 run in a plain check
Exported functions with examples: 94%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 4%

Vignettes (3)

How these are measured

Downloads

1.8K

CRAN downloads in the past year

Rank #21,703 · ~5/day · ~151/mo

Releases R versions

Daily download trend is not available in this view yet.

21530 days

61190 days

1.8K1 year

Compare downloads with other packages →

Also on72 r2u5 autocran

How downloads are counted

Repository

paulesantos/perumammals ↗Account: PaulESantos

1Stars

0Forks

0Open issues

0Open PRs

0Releases

49Commits

1Commit identities

49 commits · Last activity 2026-09-26 · 0% stars, 30d · Default branch at 0.1.0, ahead of CRAN 0.0.0.2 (checked 2026-10-22)

Responsiveness

not measured

Stars over time

2026-01-06 · 12026-07-07 · 1

How these are measured

PracticesBeta

15 development-tooling and community-health practices detected across 7 families in the upstream repository

Checks run against github.com/paulesantos/perumammals on 2026-10-22.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Governance and community (4)

Code of conductContributing guideIssue templatesSupport guide

Docs source (4)

README.Rmdpkgdown

GitHub Pages site last deployed 2026-09-26 · The repository has a site deploy workflow

pkgdown site last built 2026-09-26

Coverage (1)

Coverage reporting (Codecov)

Show all practicesHide 3 practices

Reproducibility and dev environment (1)

data-raw/

CRAN release process (1)

cran-comments.md

Lint, format, editor (2)

Lint workflowRStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

16 external dependencies (excludes base and recommended)

Installing perumammals adds 38 packages (22 with compiled code, 24 MB of source tarballs). Heaviest: stringi 11 MB, Rcpp 1.8 MB, vctrs 1.0 MB.

Depends (1)

R >= 4.1

Imports (10)

assertthat cli dplyr fuzzyjoin progress purrr readr stringr tibble memoise

LinkingTo (0)

none

Suggests (6)

ggplot2 knitr rmarkdown testthat tidyr ggtext

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Paul E. Santos Andrade

Author, Maintainer since 0.0.0.1 (2026)

Fiorella N. Gonzales Guillen

Contributor

Releases (2)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
unarchivedReturned to CRAN
2026-02-24
0.0.0.2Latest
record
2026-02-24 · current release · diff ↗
archivedRemoved from CRAN
2026-01-16
requires archived package 'fuzzyjoin'
0.0.0.1
record
2026-01-06
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2026-01-06
Total releases: 2 / 1 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.1
Bundled data: 37 KB / 4 files
Download size: 308 KB

Cite

Cite this package

Run in R for the authors' entry:

citation("perumammals")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.15381/rpb.v28i4.21019.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for perumammals version 0.0.0.2 [Data set]. HJJB, LLC. Data release v2026-10-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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