pedgene
Gene-Level Variant Association Tests for Pedigree Data
Description
Gene-level variant association tests with disease status for pedigree data: kernel and burden association statistics.
Downloads
455
Last 30 days
9211th
1.3K
Last 90 days
4.8K
Last year
Trend: +4.6% (30d vs prior 30d)
0
Last 30 days
23
Last 90 days
107
Last year
Trend: -100% (30d vs prior 30d)
8
Last 7 days
24
Last 30 days
5
All-time
autoCRAN-only: this name is served only by autoCRAN, so the count is exact.
CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | ERROR |
| r-oldrel-macos-x86_64 | ERROR |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | ERROR |
Check details (3 non-OK)
package dependencies
Package required but not available: ‘Pedixplorer’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
package dependencies
Package required but not available: ‘Pedixplorer’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
whether package can be installed
Installation failed. See 'd:/Rcompile/CRANpkg/local/4.6/pedgene.Rcheck/00install.out' for details.
Check History
ERROR 10 OK · 0 NOTE · 0 WARNING · 4 ERROR · 0 FAILURE Mar 10, 2026
package dependencies
Package required but not available: ‘Pedixplorer’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
package dependencies
Package required but not available: ‘Pedixplorer’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
package dependencies
Package required but not available: ‘Pedixplorer’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
package dependencies
Package required but not available: ‘Pedixplorer’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
Code
Structure
Lines of code
1,970
Files
32
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
6
Internal functions
1
Testing & CI
Has tests
Yes
Test-to-code ratio
1.51
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Return-value doc rate
100%
\dontrun example ratio
0%
Roxygen coverage
100%
Has pkgdown
No
NEWS present
No
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.4.0
System requirements
–
C++ standard
–
License
GPL (>= 2)
License flags
SPDX valid, OSI approved
History
Versions
14
First release
2013-11-08
Latest release
2025-09-08
Avg cadence
111 days
Cold removal rate
–
Dep drift
5
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.