R Observatory: Metrics for overlap version 0.3.9

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

overlap

0.3.9

Estimates of Coefficient of Overlapping for Animal Activity Patterns

2packages depend

24.8Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Liz A.D. CampbellFirst published 2013-05-2115 releasesCRAN page ↗

Provides functions to fit kernel density functions to data on temporal activity patterns of animals; estimate coefficients of overlapping of densities for two species; and calculate bootstrap estimates of confidence intervals. As in Ridout and Linkie (2009) doi:10.1198/jabes.2009.08038.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("overlap", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-overlap

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-overlap

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-overlap

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.4 min · r-devel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

1

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSYes · 33% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 95%
Return-value docs: 100%
References docs: 46%

Downloads

24.8K

CRAN downloads in the past year

Rank #3,222 · ~68/day · ~2.1K/mo

Releases R versions

Daily download trend is not available in this view yet.

87130 days

3.6K90 days

24.8K1 year

Compare downloads with other packages →

Also on455 r2u19 autocran

Dependencies

Declared dependencies

2 external dependencies (excludes base and recommended)

Depends (1)

suntools

Imports (0)

none

LinkingTo (0)

none

Suggests (1)

sp

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

2direct

0indirect

ct camtrapR

Code & Tests

Datasets

People & History

People (3)

Maintainer (1)

Liz A.D. Campbell

Author, Maintainer

Authors (3)

Liz A.D. Campbell

Author, Maintainer

Mike Meredith

Author

Martin Ridout

Author

Listed in earlier versions (2)

the CRAN team

no longer listed · 0.3.4.1

Liz A.D.

no longer listed · 0.3.9

Package Timeline

15 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.3.9Latest
2024-01-19 · current release · diff ↗
unarchivedReturned to CRAN
2024-01-19
archivedRemoved from CRAN
2023-12-15
0.3.4.1
2023-11-18 · diff ↗
orphanedOrphaned by its maintainer
2023-11-17
Neither the maintainer address nor that given on github are usable
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
0.3.4
2021-05-17 · diff ↗
0.3.3
2020-05-22 · diff ↗
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
0.3.2
2018-05-03 · diff ↗

Show 16 earlier events

R
R 3.5.0 released · 2018-04-23
0.3.0
2017-05-27 · diff ↗
R
R 3.4.0 released · 2017-04-21
0.2.7
2017-03-01 · diff ↗
R
R 3.3.0 released · 2016-05-03
0.2.6
2016-02-14 · diff ↗
R
R 3.2.0 released · 2015-04-16
0.2.4
2014-10-14 · diff ↗
0.2.3
2014-06-06 · diff ↗
R
R 3.1.0 released · 2014-04-10
3.0.3
2014-02-23 · diff ↗
0.2.2
2014-02-23 · diff ↗
3.0.2
2013-08-05 · diff ↗
0.2.0
2013-08-05 · diff ↗
0.1.0
2013-05-21
R
R 3.0.0 released · 2013-04-03

Package metadata

First published: 2013-05-21
Total releases: 15 / 13 yrs
License: GPL (>= 3) OSI
Bundled data: 7.7 KB / 3 files
Download size: 329 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("overlap")

Format

Campbell, L. A. D., Meredith, M., & Ridout, M. (2024). overlap: Estimates of Coefficient of Overlapping for Animal Activity Patterns (Version 0.3.9) [Computer software]. https://doi.org/10.32614/CRAN.package.overlap

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for overlap version 0.3.9 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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