neuroblastoma

2023.9.3

Neuroblastoma Copy Number Profiles

3packages depend

4.9Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Toby Dylan HockingFirst published 2013-07-232 releasesCRAN page ↗

Annotated neuroblastoma copy number profiles, a benchmark data set for change-point detection algorithms, as described by Hocking et al. doi:10.1186/1471-2105-14-164.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("neuroblastoma", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-neuroblastoma

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-neuroblastoma

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-neuroblastoma

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 35 s · r-devel-windows-x86_64

Code health

None

Tests

not tracked

Coverage

Dependencies · direct

Check history

OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-03-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: not tracked
Documented parameters: not tracked
Return-value docs: not tracked
References docs: 0%

Downloads

4.9K

CRAN downloads in the past year

Rank #16,012 · ~13/day · ~406/mo

Releases R versions

Daily download trend is not available in this view yet.

20530 days

67990 days

4.9K1 year

Compare downloads with other packages →

Also on268 r2u29 autocran

Dependencies

Declared dependencies

0 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

3direct

0indirect

binsegRcpp penaltyLearning plotHMM

Code & Tests

People & History

People (1)

Maintainer (1)

Toby Dylan Hocking

Author, Maintainer

Authors (1)

Toby Dylan Hocking

Author, Maintainer

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
2023.9.3Latest
2023-09-04 · current release · diff ↗
unarchivedReturned to CRAN
2023-09-04
archivedRemoved from CRAN
2023-08-27
email to the maintainer is undeliverable
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16
R
R 3.1.0 released · 2014-04-10

Show 2 earlier events

1.0
2013-07-23
R
R 3.0.0 released · 2013-04-03

Package metadata

First published: 2013-07-23
Total releases: 2 / 13 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.5
Bundled data: 7.8 MB / 2 files
Download size: 7.8 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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