R Observatory: Metrics for nadiv version 2.18.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

nadiv

2.18.0

(Non)Additive Genetic Relatedness Matrices

4packages depend

12.8Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Matthew WolakFirst published 2011-12-1822 releasesCRAN page ↗GitHub ↗

Constructs (non)additive genetic relationship matrices, and their inverses, from a pedigree to be used in linear mixed effect models (A.K.A. the 'animal model'). Also includes other functions to facilitate the use of animal models. Some functions have been created to be used in conjunction with the R package 'asreml' for the 'ASReml' software, which can be obtained upon purchase from 'VSN' international (https://vsni.co.uk/software/asreml).

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("nadiv", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("matthewwolak/nadiv")

Development version from matthewwolak/nadiv. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-nadiv

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-nadiv

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-nadiv

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 3.6 min · r-devel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

4

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-03-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 182 wordsVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 89%
Documented parameters: 93%
Return-value docs: 97%
References docs: 33%

Downloads

12.8K

CRAN downloads in the past year

Rank #3,717 · ~35/day · ~1.1K/mo

Releases R versions

Daily download trend is not available in this view yet.

55830 days

2.5K90 days

12.8K1 year

Compare downloads with other packages →

Also on430 r2u235 autocran

Repository

GitHub ↗ matthewwolak/nadiv

23Stars

8Forks

2Open issues

0Open PRs

11Releases

761Commits

1Contributors

761 commits · Last activity 2024-09-04

Stars over time

2025-05-02 · 232026-07-07 · 23

Repository practices

Upstream repositoryBeta

1 development-tooling and community-health practice detected across 1 family in the upstream repository

Checks run against github.com/matthewwolak/nadiv on 2026-08-23.

CRAN release process (1)

cran-comments.md

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

0 external dependencies (excludes base and recommended)

Depends (2)

R >= 4.2.0Matrix

Imports (3)

graphicsmethodsstats

LinkingTo (0)

none

Suggests (1)

parallel

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

4direct

0indirect

dmm optiSel pedtricks visPedigree

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

Matthew Wolak

Maintainer, Author

Authors (1)

Matthew Wolak

Maintainer, Author

Package Timeline

22 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
2.18.0Latest
2024-05-23 · current release · diff ↗
unarchivedReturned to CRAN
2024-05-23
R
R 4.4.0 released · 2024-04-24
archivedRemoved from CRAN
2023-12-06
issues were not corrected in time
R
R 4.3.0 released · 2023-04-21
2.17.2
2022-12-08 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
2.17.1
2021-04-06 · diff ↗
2.17.0
2021-01-14 · diff ↗
R
R 4.0.0 released · 2020-04-24
2.16.2.0
2019-10-20 · diff ↗
R
R 3.6.0 released · 2019-04-26
2.16.0.0
2018-05-10 · diff ↗

Show 24 earlier events

R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
2.14.3.1
2016-09-22 · diff ↗
R
R 3.3.0 released · 2016-05-03
2.14.3
2016-04-19 · diff ↗
2.14.2
2016-02-05 · diff ↗
2.14.1
2015-07-22 · diff ↗
2.14.0
2015-07-03 · diff ↗
2.13.3
2015-06-03 · diff ↗
R
R 3.2.0 released · 2015-04-16
2.13.2
2014-06-20 · diff ↗
2.13
2014-06-16 · diff ↗
R
R 3.1.0 released · 2014-04-10
2.12
2013-07-17 · diff ↗
R
R 3.0.0 released · 2013-04-03
2.11
2013-02-26 · diff ↗
2.10
2012-10-17 · diff ↗
2.15.2
2012-07-16 · diff ↗
R
R 2.15.0 released · 2012-03-30
2.9
2012-03-28 · diff ↗
2.15.0
2012-03-22 · diff ↗
2.8
2012-02-07 · diff ↗
2.7
2011-12-18
R
R 2.14.0 released · 2011-10-31

Package metadata

First published: 2011-12-18
Total releases: 22 / 15 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 4.2.0
Bundled data: 624 KB / 9 files
Download size: 719 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("nadiv")

Format

Wolak, M. (2024). nadiv: (Non)Additive Genetic Relatedness Matrices (Version 2.18.0) [Computer software]. https://doi.org/10.32614/CRAN.package.nadiv

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for nadiv version 2.18.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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