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mxfda

A Functional Data Analysis Package for Spatial Single Cell Data

v0.2.2-1 · Feb 19, 2025 · MIT + file LICENSE

Description

Methods and tools for deriving spatial summary functions from single-cell imaging data and performing functional data analyses. Functions can be applied to other single-cell technologies such as spatial transcriptomics. Functional regression and functional principal component analysis methods are in the 'refund' package <https://cran.r-project.org/package=refund> while calculation of the spatial summary functions are from the 'spatstat' package <https://spatstat.org/>.

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CRAN Check Status

14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies magrittr rlang tidyr purrr dplyr ggplot2 lifecycle refund reshape2 mgcv spatstat.geom spatstat.explore SpatEntropy SimDesign mxfda

Version History

new 0.2.2-1 Mar 10, 2026
updated 0.2.2-1 ← 0.2.2 diff Feb 18, 2025
updated 0.2.2 ← 0.2.1 diff Oct 6, 2024
new 0.2.1 May 7, 2024