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mssearchr

Library Search Against Electron Ionization Mass Spectral Databases

v0.2.0 · Dec 9, 2024 · MIT + file LICENSE

Description

Perform library searches against electron ionization mass spectral databases using either the API provided by 'MS Search' software (<https://chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:nistlibs>) or custom implementations of the Identity and Similarity algorithms.

Downloads

CRAN

255

Last 30 days

19335th

568

Last 90 days

2K

Last year

Trend: +104% (30d vs prior 30d)

r2u CRAN

24

Last 30 days

114

Last 90 days

400

Last year

Trend: -40% (30d vs prior 30d)

autoCRAN

3

Last 7 days

6

Last 30 days

1

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
ERROR r-devel-windows-x86_64

whether package can be installed

Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.6/mssearchr.Rcheck/00install.out' for details.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Code

Structure

Lines of code

2,842

Files

46

Compiled share

8.9%

Has compiled src

Yes

Language breakdown

R 1,392 (49%)C/C++/src 252 (8.9%)Tests 729 (25.7%)Docs 469 (16.5%)

API

Exported functions

5

Internal functions

5

Recent export changes

v0.1.1+5 LibrarySearch, LibrarySearchUsingNistApi, PreprocessMassSpectra +2 more

Testing & CI

Has tests

Yes

Test-to-code ratio

0.53

testthat edition

3

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

20%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

Yes

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

3.5.0

System requirements

C++ standard

License

MIT + file LICENSE

License flags

SPDX valid, OSI approved

History

Versions

2

First release

2024-06-25

Latest release

2024-12-09

Avg cadence

167 days

Cold removal rate

Dep drift

0

LOC over versions

v0.1.1: 2,749 LOCv0.2.0: 2,842 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies Rcpp mssearchr

Version History

3 tracked
new 0.2.0 Mar 10, 2026
updated 0.2.0 ← 0.1.1 diff Dec 8, 2024
new 0.1.1 Jun 24, 2024