R Observatory: Metrics for mopa version 1.0.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2019-12-21. Its history is shown below.

Reason: check problems were not corrected in time

Details below reflect version 1.0.1, its last release before removal.

mopa

1.0.1

Species Distribution MOdeling with Pseudo-Absences

0packages depend

–downloads / year

–test coverage

–checks pass

Overview

About

Maintained by Maialen Iturbide2 releasesCRAN page ↗GitHub ↗

Tools for transferable species distribution modeling and pseudo-absence data generation allowing the straightforward design of relatively complex experiments with multiple factors affecting the uncertainty (variability) of SDM outputs (pseudo-absence sample, climate projection, modeling algorithm, etc.), and the quantification of the contribution of different factors to the final variability following the method described in Deque el al. (2010) doi:10.1007/s00382-011-1053-x. Multiple methods for pseudo-absence data generation can be applied, including the novel Three-step method as described in Iturbide et al. (2015) doi:10.1016/j.ecolmodel.2015.05.018. Additionally, a function for niche overlap calculation is provided, considering the metrics described in Warren et al. (2008) <10.1111/j.1558-5646.2008.00482.x> and in Pianka (1973) <10.1146/annurev.es.04.110173.000413>.

Install

R (source archive)pak (dev)

url <- "https://cran.r-project.org/src/contrib/Archive/mopa/mopa_1.0.1.tar.gz"
pkgFile <- "mopa_1.0.1.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (1.0.1) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("SantanderMetGroup/mopa")

Development version from SantanderMetGroup/mopa. Installs pak first if it is not already available.

Health

CRAN checks

CRAN check results are not tracked yet.

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

19

Dependencies · direct

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 92%
Return-value docs: 93%
References docs: 47%

Downloads

mopa Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Also on2.1K conda_forge

Dependencies

Declared dependencies

17 external dependencies (excludes base and recommended)

Depends (3)

R >= 3.4.0raster sp

Imports (17)

splancs spam spatstat sampling dismorparttree e1071 earth randomForest PresenceAbsencelatticegraphicsgrDevicesgtools ranger abind

LinkingTo (0)

none

Suggests (2)

rJava caret

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (3)

Maintainer (1)

Maialen Iturbide

Author, Maintainer

Authors (1)

Maialen Iturbide

Author, Maintainer

Contributors (2)

Joaquin Bedia

Contributor

SantanderMetGroup http://meteo.unican.es

Contributor

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.0.0 released · 2020-04-24
archivedRemoved from CRAN
2019-12-21
check problems were not corrected in time
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
1.0.1
2018-02-13 · diff ↗
1.0.0
2017-06-06
R
R 3.4.0 released · 2017-04-21

Package metadata

Total releases: 2
License: GPL-3 OSI
Minimum R: ≥ 3.4.0
Bundled data: 645 KB / 4 files
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("mopa")

Format

Iturbide, M., Bedia, J., & http://meteo.unican.es, S. (n.d.). mopa: Species Distribution MOdeling with Pseudo-Absences (Version 1.0.1) [Computer software]. Retrieved August 14, 2026, from https://CRAN.R-project.org/package=mopa

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for mopa version 1.0.1 [Data set]. HJJB, LLC. Data release v2026-08-13. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-13, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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