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metevalue

E-Value in the Omics Data Association Studies

v0.2.4 · May 26, 2023 · Apache License (>= 2)

Description

In the omics data association studies, it is common to conduct the p-value corrections to control the false significance. Beyond the P-value corrections, E-value is recently studied to facilitate multiple testing correction based on V. Vovk and R. Wang (2021) <doi:10.1214/20-AOS2020>. This package provides E-value calculation for DNA methylation data and RNA-seq data. Currently, five data formats are supported: DNA methylation levels using DMR detection tools (BiSeq, DMRfinder, MethylKit, Metilene and other DNA methylation tools) and RNA-seq data. The relevant references are listed below: Katja Hebestreit and Hans-Ulrich Klein (2022) <doi:10.18129/B9.bioc.BiSeq>; Altuna Akalin et.al (2012) <doi:10.18129/B9.bioc.methylKit>.

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OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies sqldf psych dplyr metevalue

Version History

new 0.2.4 Mar 10, 2026
updated 0.2.4 ← 0.2.2 diff May 25, 2023
updated 0.2.2 ← 0.1.14 diff May 17, 2023
updated 0.1.14 ← 0.1.13 diff Mar 27, 2023
updated 0.1.13 ← 0.1.10 diff Nov 20, 2022
new 0.1.10 Oct 27, 2022